Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2416 ATGGATTTTGGTTTGATTTTATGCCTCGATCTTTTCAGAAATTATGCCAATTCATTCCTATCTCAATACGAACCAATCGTTCTGCTTCTCTCTCCTCTGCTCACTGTCCTTCTCGCCAGCACAATTCGATCGTTTTTTCATCTCGTGCACGATAAAGGACTTAAACCTACTCTTCTGGGGCTACTCATCAACTCAATCAAATTGATCCCTGGTGTGAAGAGTTACATCAATGCCGAAAAACAGAAGGTTGTGGATAAGTTGCAGTATGACCGTAAATCTAAAAGGGAAGGTTGGAGAACAGAGTTACCAAGGGTAGGACTAGGGATGGAAGTTCTGGAGAAAATGAGAGATGAGAAGAGAAATGATGTGATTTGGCAAGGCAGATGCTCTGGTACAGTCTACATCGGAGGAAGTGAATTTGATGCACACTTTTCTTTGATAAATGAGGCATGCTCAATGTTTGCACATACCAATCCCTTGCATTTGGATGTATTTCAAAGTGTTGCACACTTTGAGGCAGAAGTGGTTGCAATGACCGCTGCACTTCTTGGAGGCAAAGAAAAGAGTTCAGGGGGACAAATTTGTGGAAATATGACATCGGGAGGGACTGAAAGTATATTATTAGCTGTCAAATCATCACGCGACTATATGAAGTTTAAAAAAGGAATTACAATACCTGAAATGATAATACCTGAGTCTGCACACTCAGCATATGACAAAGCTGCTCAATATTTTAACATCAAACTCTGGCGCATCCCTGTTAACAAAAGATTTCAGGCAGATCCAAAAGCAATTCGACATCATATTAACAAAAATACCATCTTGATTGTTGGTTCTGCCCCTGGATTTCCTCATGGAATAATTGACCCCATTGAAGAACTTGGTAACCTGGCATCAAGCTTCGGAATTTGCTTTCATGTTGACCTCTGTCTTGGTGGCTTTGTATTACCTTTTGCTCGCAAGCTTGGGTACTCCATTCCACCTTTTGACTTTTCTGTTAAAGGAGTTTCTTCAATATCAGTGGACGTGCATAAATATGGTTTAGCTCCTAAAGGAACGAGTATAGTACTATACAGGAACCACGACATCAGAAAGCATCAATTTGTTGCTGTTACTGAGTGGTCTGGTGGGTTGTATGTTTCTCCAACCATGGCTGGAAGCAGGCCTGGAGGTCTTATTGCTGGAGCTTGGGCAGCAATGATGTCCTTAGGAGAAGAAGGTTACCTGGAGAATACAAAAGCAATTATGGATGTTTCGAAAAGAATACAGGAAGGTGTTTCCGGTGTGTGCAGCATAGGTGAGATTCCAGAATTATTCATCGTTGGAAGACCGGATATGACAATTGTGGCTTTTGGATCTGACGTTCTAGACATATTTGAAGTCAATGATATCATGTCATCCAGAGGGTGGCACTTGAATGCATTGCAGAGACCAAACAGCATTCATATCTGTGTGACACTGCAGCATTTGGCGGTTGTTGAAGACTTCCTCAGGGACTTGAAGGACTCTGTGATGACCGTAAAAGAAAATCCTGGTCCAGTAAGTGGAGGGTTAGCACCTATATATGGTGCGGCAGGCAAGATTCCTGATAGAGGTATGGTACAGGAATTGCTGGTAGATATCATGGACGGTACTTGTTAG 1641 0.4205 MDFGLILCLDLFRNYANSFLSQYEPIVLLLSPLLTVLLASTIRSFFHLVHDKGLKPTLLGLLINSIKLIPGVKSYINAEKQKVVDKLQYDRKSKREGWRTELPRVGLGMEVLEKMRDEKRNDVIWQGRCSGTVYIGGSEFDAHFSLINEACSMFAHTNPLHLDVFQSVAHFEAEVVAMTAALLGGKEKSSGGQICGNMTSGGTESILLAVKSSRDYMKFKKGITIPEMIIPESAHSAYDKAAQYFNIKLWRIPVNKRFQADPKAIRHHINKNTILIVGSAPGFPHGIIDPIEELGNLASSFGICFHVDLCLGGFVLPFARKLGYSIPPFDFSVKGVSSISVDVHKYGLAPKGTSIVLYRNHDIRKHQFVAVTEWSGGLYVSPTMAGSRPGGLIAGAWAAMMSLGEEGYLENTKAIMDVSKRIQEGVSGVCSIGEIPELFIVGRPDMTIVAFGSDVLDIFEVNDIMSSRGWHLNALQRPNSIHICVTLQHLAVVEDFLRDLKDSVMTVKENPGPVSGGLAPIYGAAGKIPDRGMVQELLVDIMDGTC 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2416 546 Gene3D Aspartate Aminotransferase, domain 1 109 509 IPR015422 GO:0003824
Prci9g2416 546 FunFam Sphingosine-1-phosphate lyase 1 507 545 - -
Prci9g2416 546 Gene3D - 101 543 - -
Prci9g2416 546 FunFam sphingosine-1-phosphate lyase 1 140 404 - -
Prci9g2416 546 SUPERFAMILY PLP-dependent transferases 87 504 IPR015424 -
Prci9g2416 546 PANTHER - 40 546 - -
Prci9g2416 546 Gene3D - 137 404 IPR015421 GO:0003824
Prci9g2416 546 Pfam Pyridoxal-dependent decarboxylase conserved domain 155 428 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2416 Prci-Chr9 33241010 33254814 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2416 156 506 Calmodulin-binding Proteins AT3G17760 24.796 9.19e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2416 K01634 - gmx:100794743 912.909