Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2401 ATGGCCGCTGGTCGCTCTTTCCTTCTCTTGCCGCTCTTCCTCCTCACTCTCTCCTTCTCTCCCGCTTGCCTCCCCAATTCCGAGGACGACGCCCTCCTCCAGCTCAAACGATCCTTCGCCCCTTCCTCCTCTCTCTCTTCCTGGATCCCCAATTCCTCTGCCTGCTCTGCCAGGTGGCTTGGCGTCTATTGCACCAACAACCTCGTCGTCGGTTTGCACCTCTCTAATATGGCTCTCTCTGGCACCATTGACGTCGATGCCCTCCTTCGCCTTCCTGGCCTCCGCAGCATTGGCTTTGTCAATAACTCCTTCTCCGGCCCCATCCCCCAATTCAATAAACTCACCGCCCTCAAGGCTCTCTTCCTCACCACCAATCAATTCTCCGGCCCCATCCCTCCGGATTTCTTCGCCAGCCTGGCCGCCATCAAGAAAATCGGCCTCTCTGGCAATAACTTCTCCGGCGACATACCCAACTCTCTGGCCAGGCTCCCCTTGCTTGTAGAGCTGCGCCTTGATGACAATGGATTCTCGGGAGCCATTCCGTCTTTCACTCAACACTTTCGATCGTTCAACGTTTCCAACAACCGATTGGAAGGACCCATCCCCGATGAATTGGCCAGTTTCGGCGGGACGTCCTTCTCCGGAAACCCAGGATTGTGTGGGAAAGTAGTGGGGAAGGAGTGCGAGGAGGAGGCGCGGCAACAAGGAGCAACGTCTGGGGAGAAAAGGACGGGATTGGTGAGGGCGGTCATTACGGTCATAATGGTTTCGATAGTAGTGATGCTGATAATAGTATTGATAAAGACGGCAAGGAGACAAGAGGGCAACAGAAACATGGGAGGCATCGGGGTTAGAAAGGACGGGGGAGGGGAAGAGGTGGTGCAAGTGCACGTGCCCAGCTCGAACCACAGCAGGACATCGGGATCAACTAAGAAAGGGTCGAATTCGGTTTCGAAAAGAAATGCCGTGGGGGACTTGGTGATGGTGAACGAGGAGAAGGGCGTGTTCGGGCTGCCCGATTTGATGAAGGCTGCTGCGGAGGTGCTGGGCAACGGGGGCATGGGTTCTGCTTACAAGGCCACCATGAGCAATGGATTGTCCGTGGTGGTCAAGAGGATGAGGGAGATCAACAAGATCAGCAGAGATTCCTTCGACGCCGAGATGAGACAGTTCGGCAGAATCAGACACCCAAATATCCTCGCCCCTCTCTCCTACCACTATCGCAAGGAGGAGAAGCTCATCGTGTCTCAATACATTCCCAAAGGCAGTTTGTTGTATGTCTTGCACGGGGACAGAGGAACGTGCCATGGCGACCTCCACTGGCCCACCAGGTTGAAGATTGTCAAGGGAATCGCGAGGGGGTTGAGTTTCCTGCACTCTGAATTCGGATCCCACGACTTGCCCCACGGTAACCTCAAGTCCAGCAATGTTCTGTTGAGCGATGCGTACGAGCCGCTCCTCACTGACTTCGCCTTTCATCCCCTCATCAATCCAAGCAGCGCTCCCCAGGCACTGTTTTCCTACAAAACTCCGGATTACATACAATACCAGCAAGTGTCCCGAAAAACCGATGTATATTGCCTCGGCACCATTATCCTAGAGATCATGACCGGCAAATTCCCTTCTCAGTATCACAGCAATGGCAAGGGCGGCACCGACGTTGTGCAGTGGGTGCTCACCGCCATTGCGGAGGGAAGAGAGGCCGAATTGATAGATCCCGATATCAAAACTAACGACACCGAGTCTCTCAGTCACATGCTGCAGCTTCTCCAGATCGGGGCTAGTTGCACCGAATCCAATCCTCAACAACGACTTAACTTAGGCGAAGCCATTAGAAGGATAGAGGAGGTTCAAGTCTAA 1860 0.5425 MAAGRSFLLLPLFLLTLSFSPACLPNSEDDALLQLKRSFAPSSSLSSWIPNSSACSARWLGVYCTNNLVVGLHLSNMALSGTIDVDALLRLPGLRSIGFVNNSFSGPIPQFNKLTALKALFLTTNQFSGPIPPDFFASLAAIKKIGLSGNNFSGDIPNSLARLPLLVELRLDDNGFSGAIPSFTQHFRSFNVSNNRLEGPIPDELASFGGTSFSGNPGLCGKVVGKECEEEARQQGATSGEKRTGLVRAVITVIMVSIVVMLIIVLIKTARRQEGNRNMGGIGVRKDGGGEEVVQVHVPSSNHSRTSGSTKKGSNSVSKRNAVGDLVMVNEEKGVFGLPDLMKAAAEVLGNGGMGSAYKATMSNGLSVVVKRMREINKISRDSFDAEMRQFGRIRHPNILAPLSYHYRKEEKLIVSQYIPKGSLLYVLHGDRGTCHGDLHWPTRLKIVKGIARGLSFLHSEFGSHDLPHGNLKSSNVLLSDAYEPLLTDFAFHPLINPSSAPQALFSYKTPDYIQYQQVSRKTDVYCLGTIILEIMTGKFPSQYHSNGKGGTDVVQWVLTAIAEGREAELIDPDIKTNDTESLSHMLQLLQIGASCTESNPQQRLNLGEAIRRIEEVQV 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2401 619 SUPERFAMILY L domain-like 26 208 - -
Prci9g2401 619 ProSiteProfiles Protein kinase domain profile. 343 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2401 619 Gene3D Ribonuclease Inhibitor 27 137 IPR032675 -
Prci9g2401 619 Gene3D Transferase(Phosphotransferase) domain 1 419 619 - -
Prci9g2401 619 SUPERFAMILY Protein kinase-like (PK-like) 347 614 IPR011009 -
Prci9g2401 619 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 618 IPR046959 -
Prci9g2401 619 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Prci9g2401 619 Gene3D Phosphorylase Kinase; domain 1 310 418 - -
Prci9g2401 619 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
Prci9g2401 619 Gene3D Ribonuclease Inhibitor 138 231 IPR032675 -
Prci9g2401 619 Pfam Leucine rich repeat 116 175 IPR001611 GO:0005515
Prci9g2401 619 MobiDBLite consensus disorder prediction 298 317 - -
Prci9g2401 619 FunFam Nuclear pore complex protein NUP107 25 182 - -
Prci9g2401 619 Pfam Protein kinase domain 347 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2401 Prci-Chr9 33089564 33092222 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2401 6 619 Receptor kinase-like Gene Family AT3G42880 48.746 0.0 617
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Prci9g2401 Pkinase 9.3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2401 - - gmx:100816925 744.191