Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2389 ATGGACGACAGCGGAGGCTCTAAATTGAGCAGAATTGGGCAGATTGTGCGACTAAAGGAGATGATTCAGAAGTGGCAATCTGTCACCCTGAGTTCAAAAGTGAACTGTCAACCTGCTGACTTGAATCACGGGGGCATAGCACCAATGATTAACAGAAGGCTGAGGAGCGTCATGTACTGTGACTCGGATGAAGAAAGCTGCCAGAGCCCTGAGCCGCCACCTGATGTTCCCAAAGGGTATTTGGCAGTCTATGTCGGGCCAGAGCTTCGGAGGTTCATCATTCCCACCAGCTATCTTAGTCACTCTCTATTCAAAGTGTTGCTGGAAAAGGCTGCCGACGAATTCGGGTTTGAGCAAAGTGGCGGGCTCACTATCCCATGTGAGATTGAGACTTTTAAATTCCTCCTAAACTGCATGGAGAACAACCAGAAAGATCAACATGATGAAAGCTCCTCTGGAAACGCAGGAACTATTGAAGAGTAA 483 0.4803 MDDSGGSKLSRIGQIVRLKEMIQKWQSVTLSSKVNCQPADLNHGGIAPMINRRLRSVMYCDSDEESCQSPEPPPDVPKGYLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAADEFGFEQSGGLTIPCEIETFKFLLNCMENNQKDQHDESSSGNAGTIEE 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2389 160 Pfam Auxin responsive protein 59 138 IPR003676 GO:0009733
Prci9g2389 160 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 58 134 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2389 Prci-Chr9 33042124 33044522 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2389 1 153 Calmodulin-binding Proteins AT5G20810 66.667 7.53e-72 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2389 K14488 - gmx:100795275 242.276