Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2377 ATGGCTCCCCCTTCCATCTTCCCCCTCTCTCTCCTCCTCCTCCTCCTCCTCCTCGCAGCTTCTCCTCCCGCTTCGTCCCACCAGGTCGTCGCCTCCGACTGCCTCAAGGTTTCCTCCTCCCAGTTCTCTTCCTCCGTCTCTCAGGCCCTCCATGTCTTGCGCCAGCTTATCTCCCTCTTGTCCCGCTTCTCTGATTTCTCCCCCGACTCTCGCATCTCCCGTGCAGTTTTCGACTGCCTCGATTTGCTCGACGTGTCCTCCGATCAACTTTCCTGGTCCGCTTCTGCTTCTCAATCTCCCCAAGGCAAGCATAACGGTACTGGAAACCTGAGCTCCGATTTGAGGACCTGGTTGAGCGCCGCGCTGGCGAATCCGGAGACATGCATGGACGGTTTTGAAGGCACCGACAGCATCGTGAGCAGTCTGATATCCAGCGGCCTGGGACAGGTGACCTCGTTGGTGCAGGAGCTGCTGGCCCAGGTGCACACTGTCCCGGACCATTTCTCCAGCCGCAAGAGCTGGTTCCCCTCCTGGATTAAACCTCGGGACCGCAAGCTCCTGCAGGCCAATGGCGTGCCGGTAGATGTGGTGGTGGCTGCTGATGGGACCGGAAATTACACCAAGGTGATGGATGCGGTGCTTGCAGCTCCTGACTATAGCATGAAGCGCCATGTTATATATGTTAAGAGAGGCGTGTACACCGAGAACGTGGAGATCAAAAAGAAGAAGTGGAACCTCATGATGATTGGTGACGGTATGGATGCCACCATAATCTCCAGCAACCGTAGTTTCGTGGACGGTTGGACGACCTTCCGCACCGCTACTTTTGCTGTCAGCGGGAGAGGGTTCATAGCACGAGACATGGGGTTCCAGAACACGGCAGGGCCGGAGAAGCACCAGGCAGTGGCACTGAGATCCGACTCGGACCTCTCAGTGTACTACCGATGCGGCATTTATGGATACCAGGACAGCCTCTACACCCACACGATGCGGCAATTCTACAGAGAATGCAAGATCAGCGGCACGGTGGACTTCATCTTCGGGGACGCCACGGCCGTGTTCCAAAACTGCCAGTTAGTGGCAAAGAAGGGCCTGGCAAATCAAAAGAACACCATCACGGCTCAGGGGCGAAAGGACCCCAACGAGCCGTCGGGTTTCTCCTTCCAGTTCTGCAACGTGTCGGCAGATTCAGACCTGGTGCCGTGGCTGAACTCGACGCAGACGTACCTGGGAAGACCGTGGAAGAGCTACTCACGAACAGTGTTCATGCAATCGTACATGAGCGAGGTCGTGAGGCCAGAAGGGTGGCTGGAGTGGAACGGGGACTTCGCGCTGGACACATTGTACTACGCCGAGTACCTGAATTACGGGGCCGGAGCAGCGCCGGAGAAGCGAGTCAAATGGGGAGGCTACCGGCCTCTGAACGATTCCAGCCAGGCCGCTAACTTCACGGTGGCTCGCTTTATTGAGGGCAATCTCTGGTTACCTTCAACGGGGGTCACTTACACCGCCGGCTTAGGGGTTTGA 1527 0.573 MAPPSIFPLSLLLLLLLLAASPPASSHQVVASDCLKVSSSQFSSSVSQALHVLRQLISLLSRFSDFSPDSRISRAVFDCLDLLDVSSDQLSWSASASQSPQGKHNGTGNLSSDLRTWLSAALANPETCMDGFEGTDSIVSSLISSGLGQVTSLVQELLAQVHTVPDHFSSRKSWFPSWIKPRDRKLLQANGVPVDVVVAADGTGNYTKVMDAVLAAPDYSMKRHVIYVKRGVYTENVEIKKKKWNLMMIGDGMDATIISSNRSFVDGWTTFRTATFAVSGRGFIARDMGFQNTAGPEKHQAVALRSDSDLSVYYRCGIYGYQDSLYTHTMRQFYRECKISGTVDFIFGDATAVFQNCQLVAKKGLANQKNTITAQGRKDPNEPSGFSFQFCNVSADSDLVPWLNSTQTYLGRPWKSYSRTVFMQSYMSEVVRPEGWLEWNGDFALDTLYYAEYLNYGAGAAPEKRVKWGGYRPLNDSSQAANFTVARFIEGNLWLPSTGVTYTAGLGV 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2377 508 Pfam Plant invertase/pectin methylesterase inhibitor 28 142 IPR006501 GO:0004857
Prci9g2377 508 Gene3D - 191 506 IPR012334 -
Prci9g2377 508 FunFam Pectinesterase 189 506 - -
Prci9g2377 508 CDD PMEI-like_4 49 165 - -
Prci9g2377 508 ProSitePatterns Pectinesterase signature 2. 339 348 IPR033131 -
Prci9g2377 508 SMART PMEI_2 25 160 IPR006501 GO:0004857
Prci9g2377 508 SUPERFAMILY Pectin lyase-like 192 505 IPR011050 -
Prci9g2377 508 Pfam Pectinesterase 195 492 IPR000070 GO:0030599|GO:0042545
Prci9g2377 508 PANTHER PECTINESTERASE 30 496 - -
Prci9g2377 508 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 159 IPR035513 -
Prci9g2377 508 Gene3D Invertase/pectin methylesterase inhibitor family protein 20 164 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2377 Prci-Chr9 32973809 32976221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2377 5 506 Carbohydrate Esterase AT3G43270 61.240 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2377 K01051 - gmx:100777500 712.605