Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2369 ATGGAAGCGAAAGTTGCAGTAAAAGGATTGGTGGAAGCTGATGAAAAGCCACCGCACACATGTGATAATGATATTACAGATGCAGCATCACACGAGAATCATACTTTGGGATCCACTCTTCTCCGTTTGAGTCTGAATAACCCGGAAGCACGGTCTCACAAAATTGAAGAGCATCCCGCAGCCCAACTGGGCCTGCTGCGGAACAAGATAGAGGAAATGAAGAAAGAGAATCAGAATCTAAAAGCTATGCTGTGTCAGATCACTCAACATTACGCTGCTCTTCAGAATCGCCTGGTTTTGACGATGCATCAGCAGCAGCAAGAACAATCGCCTCTGAAGGCTCATAATTTGCAGAAAGAAGATAAAGGAGATGACGAGGAGAAAGCAGCGTTGCCCATCCAGCAGTTCTTGGATATCCTTGAGCCTTCGCCTTCAGAAAGCAACAAATCAGAAGGATTTGTTTCTCCCCGGAACAGCATCATGTGCAGCAAACCTGCAAGTGAAGCCAACAACAATAATGCGAAAAACATAGAGGATGATCAAGCATCTGATCAGGCAAATTCTTGCAGAAAAGTTAGAGTGTCCATAAGGACACGTTCGGATATTTCTTTGATTGGTGATGGGTGTCAATGGAGAAAGTATGGACAAAAGATAGCCAAGGGAAACCCGTGTCCTCGGGCTTACTATCGTTGCAACATGGGAACCGGGTGTCCAGTTCGTAAGCAGGTGCAAAGGTGTGCTAAGGATAAGAGCATTGTGATTACAACCTATGAAGGGAAGCATAATCATGCACTAGCTGCATCAGCCGCACCCATGGCAGCGGCAACATCAGCAGCATTGAACATGTTCCTCTCTAGCTCAACCATCAGTGCACATGGCAGCACGCAATCAAACTCCGGTCTCTTCTCTTCTGTACTCTCTTCTTCTGCCTTGCCTGCCTTTGCTTCCTTGTCCACAACATCATCATGTCCTACCATAACCCTGGACTTAACCCACCCCTCCTCCAATCAATATTTGCAATTCCAAATGTCTGCCTCATCAAGCCACTCCCATCACCCATTTCCTTTTGCGTTGGATGGTTATGACACCCCACAATCTCAGTGCTCATCCTTGTCAAACGTGTCCTTGGTAGATGTCGTCAGTGCGGCTTTGGTTAAAGATCCTTCATTCAAGGCGGCTTTAGCTGCGTCCATTTCTTCATTTGCCGGAGCCACTTCCTTACAGCGTTGA 1230 0.4675 MEAKVAVKGLVEADEKPPHTCDNDITDAASHENHTLGSTLLRLSLNNPEARSHKIEEHPAAQLGLLRNKIEEMKKENQNLKAMLCQITQHYAALQNRLVLTMHQQQQEQSPLKAHNLQKEDKGDDEEKAALPIQQFLDILEPSPSESNKSEGFVSPRNSIMCSKPASEANNNNAKNIEDDQASDQANSCRKVRVSIRTRSDISLIGDGCQWRKYGQKIAKGNPCPRAYYRCNMGTGCPVRKQVQRCAKDKSIVITTYEGKHNHALAASAAPMAAATSAALNMFLSSSTISAHGSTQSNSGLFSSVLSSSALPAFASLSTTSSCPTITLDLTHPSSNQYLQFQMSASSSHSHHPFPFALDGYDTPQSQCSSLSNVSLVDVVSAALVKDPSFKAALAASISSFAGATSLQR 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2369 409 SUPERFAMILY WRKY DNA-binding domain 197 264 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci9g2369 409 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 52 403 IPR044810 GO:0003700
Prci9g2369 409 Pfam WRKY DNA -binding domain 207 263 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci9g2369 409 SMART WRKY_cls 205 265 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci9g2369 409 Coils Coil 63 86 - -
Prci9g2369 409 ProSiteProfiles WRKY domain profile. 200 266 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci9g2369 409 MobiDBLite consensus disorder prediction 105 127 - -
Prci9g2369 409 Gene3D WRKY domain 189 266 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2369 Prci-Chr9 32899430 32902256 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2369 66 401 WRKY Transcription Factor Family AT4G04450 37.871 6.82e-61 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci9g2369 WRKY 5.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2369 - - pcin:129319814 744.191