Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2362 ATGGTGATCCTGAAACTGGGTAACTCCCCGACGGAGAAGGATGAAGGAATAATGAGGCTCGCCAATTACGAGGTTGGCAGAACTCTGGGCACTGGCAGCTTCGCCAAGGTCAAATTGGCCAAACATGTCAATTCTGATCAGCTCTTTGCCCTCAAGATCATCGACAAGACCAAGATCTTCCATCTCAATATCGCTCATCAGATAACACGGGAGATAGCCACCCTCAAGCTTCTCAAGCATCCCAACGTCGTCAGATTACACGAGGTTTTGGCTAGCAAAACGAAAATTTACTTGGTCTTAGAGTACGTCACTGGAGGAGAATTGTTTGACAGAATTGCATCCAAAGGTAGACTGAAAGAAGCTGAAGGTAGGAAGCTTTTCCAACAGTTAATTGATGGTGTGAGCTACTGTCACAATAAAGGAGTCTTCCACAGGGATCTTAAGCTGGAGAATGTACTGGTGGATGCCCAAGGCAACATAAAGATAACCGATTTTGGCCTTAGTGCTTCGCCCCAGCACATTCGGGCCGACGGGTTGCTGCATACAACCTGTGGAAGCCCCTGCTATGTTGCTCCAGAGGTCCTTGCTAATAGAGGCTATGAAGGTGCAACATCAGATACGTGGTCATGTGGTGTTATCTTGTTTGTAATCCTAACGGGGTATCTTCCTTTTGAAGATCGAAATATTGCCGTTCTCTACCAAAAGATATCTAAAGGAGATGTCCGGATGCCAAAATGGCTATCATCTGGTGCCCAGAACTTGCTAAGGAGGATTCTTGACCCCAATCCTCTTACCCGGATAACACTGGCTGGTATCAAAGATGATGAATGGTTCCAGCAGGACAATGTTCCGGCAAATCCTGAGGACGAAGAGGAAGAGAAAGAGAATGATGTTTCTGAGAGGAAGATGAGATTTACATCCAACCATTCAGCAAAAGATCTGATCGCAAAGATTGAAGACATTGGAAAAGAAATGGGTTTTAGAGTCCAGAAGAAAAATGGAAAATTGAAAGTGATACAAGAGAATAAGGCGCACAGAAGTCTAGGTGGCCTCTCGGTGGCAGCAGAGGTCGTTGAAATAAGTGCATCCTTGCATGTGGTAGAGTTAATGAAATCGTTTGGAGACTCTTCTGTATATAGGCAGTTATGCAAGAAACTATCAGATGATTTGGCAGTAGCCCCGAGCCAAGCGCGTGTAAATTCGGAAGTGGGAGAAGCCGGGGAAAAGAGTTAA 1233 0.4542 MVILKLGNSPTEKDEGIMRLANYEVGRTLGTGSFAKVKLAKHVNSDQLFALKIIDKTKIFHLNIAHQITREIATLKLLKHPNVVRLHEVLASKTKIYLVLEYVTGGELFDRIASKGRLKEAEGRKLFQQLIDGVSYCHNKGVFHRDLKLENVLVDAQGNIKITDFGLSASPQHIRADGLLHTTCGSPCYVAPEVLANRGYEGATSDTWSCGVILFVILTGYLPFEDRNIAVLYQKISKGDVRMPKWLSSGAQNLLRRILDPNPLTRITLAGIKDDEWFQQDNVPANPEDEEEEKENDVSERKMRFTSNHSAKDLIAKIEDIGKEMGFRVQKKNGKLKVIQENKAHRSLGGLSVAAEVVEISASLHVVELMKSFGDSSVYRQLCKKLSDDLAVAPSQARVNSEVGEAGEKS 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2362 410 Pfam NAF domain 299 331 IPR004041 GO:0007165
Prci9g2362 410 Pfam Protein kinase domain 23 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2362 410 Gene3D Phosphorylase Kinase; domain 1 11 104 - -
Prci9g2362 410 SMART serkin_6 23 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2362 410 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Prci9g2362 410 MobiDBLite consensus disorder prediction 280 299 - -
Prci9g2362 410 FunFam Non-specific serine/threonine protein kinase 14 102 - -
Prci9g2362 410 CDD CIPK_C 296 390 - -
Prci9g2362 410 FunFam Non-specific serine/threonine protein kinase 16 319 - -
Prci9g2362 410 ProSiteProfiles Protein kinase domain profile. 23 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2362 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Prci9g2362 410 Gene3D Transferase(Phosphotransferase) domain 1 105 282 - -
Prci9g2362 410 SUPERFAMILY Protein kinase-like (PK-like) 20 286 IPR011009 -
Prci9g2362 410 Gene3D Kinase associated domain 1, KA1 283 392 - -
Prci9g2362 410 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 19 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2362 Prci-Chr9 32877714 32882777 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2362 86 399 CBL-interacting serine-threonine protein kinases AT3G17510 58.056 9.08e-145 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Prci9g2362 Pkinase 8.2e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2362 K07198 - qsa:O6P43_003749 568.54