Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2355 ATGGCATCAGGTCTAAATTCAGGAATGTCCAAGAAGACATTTATTTTTGGTTTGAAACTGTGGGTATTAATAGGAATAACAGTTGGTTTGTTCATCGTGATAATTCTCGTGGTACTAGTATGTCTTACTTCCCGTAAGAGATCCAAAAGTGTCAATGGCAAGGTTCCTTTTAGCCATATGTTATCATCAATTTCAGAAGAGATCAAAGAGATTAGAGTTGATCAAGTTTCAGCTAATAACCATTTGCAGAATGGAACTTTTATGAGTCTGAATGACAAATTTAGTGACAGGGATTCTGAGAAGGTTTTGTTCCAAACAAAAATTGGGGATACCAGCAGTCAATCAGGTTCATTTAATCATATGGAGAAAGATGCTGCTGGTTCTCAATCTGGCGAAGAAAGCAGTGCTATGACCATTTCTGCTTACCGGTCATCATTGCATCCTATGACTGCACCATCACCATTGTCTGGTCTGCCTGAATTCTCTCACCTTGGCTGGGGGTACTGGTTTACATTAAGGGAACTAGAACTTGCAACAAACAGGTTTTCAAGGGAAAATGTTATTGGTGAAGGTGGGTATGGAGTTGTTTATCGTGGTGAGCTAATTAATGGGAATCCAGTGGCTGTTAAGAAGCTACTCAATAATTTAAGACAAGCTGAAAAGGAATTTAGAGTGGAGGTTGAGGCTATTGGTCACGTGCGCCATAAAAACTTGGTTCGACTTCTGGGTTATTGCATTGAAGGGACTCACCGGTTGCTGGTTTATGAATATGTTAACAATGGAAATTTAGAGCAATGGCTTCATGGAGCCATGCGGCAATATGGTTATCTAACTTGGGATGCACGAATGAAAGTGCTGCTGGGCACAGCTAAAGCGCTGGCTTACTTGCATGAGGCAATTGAACCTAAAGTGGTTCATCGAGATATTAAGTCAAGCAATATTCTAATTGATGATGACTTCAATGCTAAAATATCTGACTTTGGGCTCGCTAAGTTGCTTGGCGCTGGGAAAAGTCATATTACAACTAGAGTAATGGGTACTTTTGGATATGTGGCTCCGGAATATGCCAATTCTGGCTTGCTAAATGAGAAGAGTGATATCTATAGCTTTGGGGTATTGCTTCTGGAAGCAATTACTGGTAGGGATCCAGTGGATTATGGTCGACCAGCAGCTGAGGTAAATTTAGTAGATTGGCTCAAGTTGATGGTAGGGAGTAGGCGTTCAGAAGAGGTAGTGGACCCCAACATTGAGACTAGACCATCAACAAGTGCCCTTAAACGAGCCCTTTTGACTGCTTTGAGGTGCGTTGATCCCGATGCTGAGAAAAGGCCAAAGATGAGTCAAGTTGTTCGTATGCTTGAATCGGAGGAATATCCCATACCAAGAAAGGATCGCAGACGCCGAAGAAGTCAGGCAGGAAACTCGGGGGGGCAGGAGCAGAGGGAGGCTTCTGATACAGAAAAGAGTGACAACTCGGATTATGGGTCCAACGGCAGAATGAAGCAACAGAGCTAA 1515 0.4257 MASGLNSGMSKKTFIFGLKLWVLIGITVGLFIVIILVVLVCLTSRKRSKSVNGKVPFSHMLSSISEEIKEIRVDQVSANNHLQNGTFMSLNDKFSDRDSEKVLFQTKIGDTSSQSGSFNHMEKDAAGSQSGEESSAMTISAYRSSLHPMTAPSPLSGLPEFSHLGWGYWFTLRELELATNRFSRENVIGEGGYGVVYRGELINGNPVAVKKLLNNLRQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRLLVYEYVNNGNLEQWLHGAMRQYGYLTWDARMKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDIYSFGVLLLEAITGRDPVDYGRPAAEVNLVDWLKLMVGSRRSEEVVDPNIETRPSTSALKRALLTALRCVDPDAEKRPKMSQVVRMLESEEYPIPRKDRRRRRSQAGNSGGQEQREASDTEKSDNSDYGSNGRMKQQS 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2355 504 ProSitePatterns Protein kinases ATP-binding region signature. 188 211 IPR017441 GO:0005524
Prci9g2355 504 Gene3D Phosphorylase Kinase; domain 1 164 257 - -
Prci9g2355 504 CDD STKc_IRAK 188 454 - -
Prci9g2355 504 PANTHER OS01G0323000 PROTEIN 5 483 - -
Prci9g2355 504 SUPERFAMILY Protein kinase-like (PK-like) 166 460 IPR011009 -
Prci9g2355 504 ProSiteProfiles Protein kinase domain profile. 182 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2355 504 Gene3D Transferase(Phosphotransferase) domain 1 258 469 - -
Prci9g2355 504 FunFam Putative receptor-like protein kinase 164 257 - -
Prci9g2355 504 SMART serkin_6 182 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2355 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 304 316 IPR008271 GO:0004672|GO:0006468
Prci9g2355 504 MobiDBLite consensus disorder prediction 443 464 - -
Prci9g2355 504 Pfam Protein kinase domain 183 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2355 504 MobiDBLite consensus disorder prediction 113 134 - -
Prci9g2355 504 MobiDBLite consensus disorder prediction 443 504 - -
Prci9g2355 504 Coils Coil 209 229 - -
Prci9g2355 504 FunFam Putative receptor-like serine/threonine-protein kinase 258 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2355 Prci-Chr9 32838365 32842994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2355 17 456 Trihelix Transcription Factor Family AT1G70460 38.652 1.17e-94 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Prci9g2355 Pkinase 2.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2355 - - gmx:732653 816.994