Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2337 ATGGATGTAAAAGTAAGAGGAAGCACCTCCGCCGCTTTCCAACCGGACTTCGCCGACGACCACGACCTCCGACGAGGCCCTTGGACCGTCGACGAGGACCTCACCCTCATTAATTACATTACCACTCACGGCGAAGGTCGCTGGAACTCCCTTGCCCGCTCCGCCGGCCTCAAGCGTACTGGGAAGAGTTGCAGATTGAGGTGGCTCAATTATCTCCGTCCCGATGTTCGGCGTGGAAATATCACGCTGGAAGAACAGCTTCTGATTCTCGAACTTCATTCTCGCTGGGGAAACAGGTGGTCCAAGATAGCCCAGTATTTGCCGGGGAGAACCGACAATGAGATCAAGAATTACTGGAGAACCCGCGTCCAAAAGCATGCCAAGCAACTCAAATGTGACGTGAATAGTAAGCAATTCAAGGACACCATGCGCTACCTTTGGATGCCCAGGTTGGTTGAGCGCATTCAAGCAGCAGCCACGGCGGCTTCCACCGCCTCCACAACGGCTAGTTCTCAGACGTTATCTGCCGCCACGACCGTCACCACAAACTCCACGTACAATCATTATAATAACAAGATGGAAGTTGAGAATGGGAACATGATGATGAACCCGGCCATCATGAATAATAATGAATTTGGAGGTTCGCAGGTGACGCAGAGCTACACGCCGGAAAATAGCAGCACGGGCGCTTCATCGGAGTCGTTCGGGACACAGGTTTCACCGGTGTCAGAATTGACTGATTATTACAGTACTGTCCCTAATAGTCAGGATTACTACCAACCCTCTCAGATCAGCTACTCTGATTGCATTACCAGCCCATCTGGGTTATACAGTCAGGGACTGGATTATTCCCAGGTGATGGAGGCGGGCAACCCGTGGATTCAGGGAGGGGACACGTTGGACAGTCTGTGGAATGTTGAGAATATGATGTTTTTGCAGCAGCAGCTCAATATCGACACCATGTAA 966 0.5145 MDVKVRGSTSAAFQPDFADDHDLRRGPWTVDEDLTLINYITTHGEGRWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAATAASTASTTASSQTLSAATTVTTNSTYNHYNNKMEVENGNMMMNPAIMNNNEFGGSQVTQSYTPENSSTGASSESFGTQVSPVSELTDYYSTVPNSQDYYQPSQISYSDCITSPSGLYSQGLDYSQVMEAGNPWIQGGDTLDSLWNVENMMFLQQQLNIDTM 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2337 321 SMART sant 77 125 IPR001005 -
Prci9g2337 321 SMART sant 24 74 IPR001005 -
Prci9g2337 321 Gene3D - 25 77 - -
Prci9g2337 321 Gene3D - 82 145 - -
Prci9g2337 321 SUPERFAMILY Homeodomain-like 22 119 IPR009057 -
Prci9g2337 321 FunFam MYB transcription factor 82 145 - -
Prci9g2337 321 CDD SANT 98 121 IPR001005 -
Prci9g2337 321 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 20 205 IPR044676 GO:0003700|GO:0006355|GO:0043565
Prci9g2337 321 Pfam Myb-like DNA-binding domain 78 121 IPR001005 -
Prci9g2337 321 Pfam Myb-like DNA-binding domain 25 72 IPR001005 -
Prci9g2337 321 CDD SANT 27 72 IPR001005 -
Prci9g2337 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 76 IPR017930 -
Prci9g2337 321 MobiDBLite consensus disorder prediction 213 237 - -
Prci9g2337 321 ProSiteProfiles Myb-like domain profile. 73 123 IPR001005 -
Prci9g2337 321 ProSiteProfiles Myb-like domain profile. 20 72 IPR001005 -
Prci9g2337 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 77 127 IPR017930 -
Prci9g2337 321 FunFam Myb transcription factor 25 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2337 Prci-Chr9 32712811 32714944 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2337 16 312 MYB Transcription Factor Family AT3G06490 54.890 1.78e-89 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci9g2337 Myb_DNA-binding 1.8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2337 K09422 - gmx:100791349 416.772