Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2334 ATGGAGGAAAACCTACCTCCTGGGTTCAGATTCCATCCTACAGATGAAGAGCTCATCACGCATTATCTGACAAGGAAGGTGTGCGATACCAGCTTCACATCCAAAGCCATAGCAGTCGTTGATCTCAACAAGAACGAGCCTTGGGATCTTCCAGGAAAAGCAAGAATGGGAGAGAAGGAATGGTATTTCTTCAGCGTGAGAGATCGCAAGTACCCGACGGGGCTGAGAACGAACAGAGCGACAGAAGCAGGGTACTGGAAGACGACAGGAAAAGACAAAGAAATAATGAGGGAAAGCGCAGTGGTGGGAATGAAGAAAACGCTCGTCTTCTACAAGGGCAGAGCTCCCAGGGGCGAGAAAACCAACTGGGTCATGCATGAATACCGCCTTCACATCAACCACTCTTTTAGGCCTTCTAAGGAAGAATGGGTGGTTTGTAGGGTCTTCCAGAAAAGCTCGGCGGCAAAGAAAGCACAACAGACGTCATCCTCACAACTATCTCTGGACTCTCCTCCTGATAATACCTCTTTGGTCAATGAATTTGGGGATGTTGACCTCCCAAATTTAAACACCATGACTGCAAATTCATCCAGTGGCGGCTTCACCGCCATGTCCTCCCAAATTTACAATAGCCATGTCAATACGAATATGAACTTGACATCTGATCATCGGCTTCCCTCTCTTCCATCCCTCCCATGGCCTTCTGGTCTGCTGAACCCTAACGTTTCCGTGAATTCCTTGCTTCTCAAGGCATTGCAGCTCCGGAGTTGTCAGCAAAGAGAAATTGCAATGACGGATCATTTCGTTTCATATGCTCCGCCTCAAGGGGTTTCCCAAGTGATGGAAAGTACTAATCATCTCACTCCAAATCTCAGACTGGATGCTTCTTCCTCATCCAAGGTTTTAGATATGCCACAGCAACAGCAGCAGGAGCAACCGTTCAGTCTGGACTCCATTTGGTGA 963 0.4787 MEENLPPGFRFHPTDEELITHYLTRKVCDTSFTSKAIAVVDLNKNEPWDLPGKARMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKTTGKDKEIMRESAVVGMKKTLVFYKGRAPRGEKTNWVMHEYRLHINHSFRPSKEEWVVCRVFQKSSAAKKAQQTSSSQLSLDSPPDNTSLVNEFGDVDLPNLNTMTANSSSGGFTAMSSQIYNSHVNTNMNLTSDHRLPSLPSLPWPSGLLNPNVSVNSLLLKALQLRSCQQREIAMTDHFVSYAPPQGVSQVMESTNHLTPNLRLDASSSSKVLDMPQQQQQEQPFSLDSIW 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2334 320 MobiDBLite consensus disorder prediction 298 320 - -
Prci9g2334 320 SUPERFAMILY NAC domain 3 151 IPR036093 GO:0003677|GO:0006355
Prci9g2334 320 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 223 - -
Prci9g2334 320 ProSiteProfiles NAC domain profile. 5 151 IPR003441 GO:0003677|GO:0006355
Prci9g2334 320 Gene3D NAC domain 14 156 IPR036093 GO:0003677|GO:0006355
Prci9g2334 320 FunFam NAC domain-containing protein 100-like 14 155 - -
Prci9g2334 320 Pfam No apical meristem (NAM) protein 6 130 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2334 Prci-Chr9 32677289 32678853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2334 1 320 NAC Transcription Factor Family AT3G18400 58.507 2.23e-116 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci9g2334 NAM 2.7e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2334 - - gmx:100780030 401.364