Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2327 ATGGCCGAATTTGCAACAGATTTGCAAGCGTTTAGATCATCTTTTCATTTCTTAGATATTGATCCAAGCATGGAACTGATAAACCAATTCACAGGGATGAGGCCATGTGTCTTGGACAACTCAGCTCTTCATTTTCAAAGCTTGATTTCTTTCTCCTGTGACACCTCCTTAGCCTCCCCTCAGCCTCAATTTGAAAGAAAATTGGAGGAAATTTTTCCTAGCCTTGTCCATCATGTCAACCACAATGCTGTTCCAGTTTCTTCGCCCAATTTTCCTGGGGAAAATGAAGTTCATGAAAGTAAAAAGAGGAAACCAACAGATGTGCTACAGACCAATTCCACAAATTCAACTCCTGCACCTTTTGAGAGTGGAAGCAAAACGAAAAATAGTTTTAAAAGAAGTAAGAAGGTAAAAAGCAATGTAACAGATGTAGACAATTCAAAGGACGTGGTTCATGTCAAAGCCAAAAGAGGTCAAGCTACTGATAATCACTATTTAACAGAAAGGGTTAGAAGAGGGAAAATCAATGAGAAGTTAGGGTGCTTACAGGACATTGTTCAAGGATGCTGCAAGACTATGGGTATGACCGTAATGTTGGATGAGATCATAAACTATGTTCAGTCCTTGCAACATCAAGTGGAGTTCCTCTCCGTGAAGCTTATTGTAGCAAGCAACTTCTGTGACTTCAATTTAGAGACAGATGCCTTGGAAACAATGCAGGTAGCAATGGCAGCTGAGGCAAAAGAGTTATCTAAACATGGGAGAGAAGGCTTCGTAGGAATTTCTTATTTTCAACCGACCTAG 804 0.4017 MAEFATDLQAFRSSFHFLDIDPSMELINQFTGMRPCVLDNSALHFQSLISFSCDTSLASPQPQFERKLEEIFPSLVHHVNHNAVPVSSPNFPGENEVHESKKRKPTDVLQTNSTNSTPAPFESGSKTKNSFKRSKKVKSNVTDVDNSKDVVHVKAKRGQATDNHYLTERVRRGKINEKLGCLQDIVQGCCKTMGMTVMLDEIINYVQSLQHQVEFLSVKLIVASNFCDFNLETDALETMQVAMAAEAKELSKHGREGFVGISYFQPT 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2327 267 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 159 209 IPR011598 GO:0046983
Prci9g2327 267 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 95 237 IPR024097 GO:0006355
Prci9g2327 267 MobiDBLite consensus disorder prediction 107 127 - -
Prci9g2327 267 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 157 224 IPR036638 GO:0046983
Prci9g2327 267 Gene3D - 156 222 IPR036638 GO:0046983
Prci9g2327 267 MobiDBLite consensus disorder prediction 84 142 - -
Prci9g2327 267 SMART finulus 165 215 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2327 Prci-Chr9 32645367 32647155 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2327 110 257 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 59.459 9.58e-49 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2327 - - gmx:100806942 326.635