Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2326 ATGAAGGTCGCCGTTGGTGAAGCCGCCGCGGAATTCGTGCTCTTACTGCAATCCATGAGTTTTGTGTTTAGATTATGCCCCTGCTTGAAGAGGAGGTTCAAGGCCAACGCCGCCTCTGATTCTCCCCATCCTCAACCACCCAACGATGTTGCCGACACGTGGGACCTGTTCTTCGACCTCCACACTCTGCAGCTAGCCACTAACTTCTTCTCCGAGCTGAACCAGTTAGGTCATGGAGGTTTTGGTCCTGTTTACAAGGGGTTGATGCCAAATGGTCAAGAAATAGCCGTGAAGAAGCTGTCTCTAGAATCAAGACAAGGAGTTAGAGAATTTACCAATGAGGTCAAACTACTGCTGAGAATTCAGCATAAGAACTTGGTTACATTATATGGGTGTTGTGCTGAAGGACCTGAAAAGATGCTTGTTTATGAGTATCTTCCAAACAAGAGTCTTGATCACTTTCTCTTTGATAAAGGAAAGTTACCATCTCTGGACTGGGCAACACGATTTAGAATAGTTACAGGTGTGGCAAGAGGACTTTTGTACTTGCATGAAGAGGCCCCGATAAGAATCATTCATAGAGACATCAAAGCCAGTAACATTTTGCTGGATGAGAAGTTAAGTGCAAAAATTTCAGACTTTGGCCTAGCAAGACTATTTCCTGGGGATGACACTCATGTGCAGACATTTAAGATTTCTGGTACACATGGTTACATGGCTCCTGAATATGCAATGCGTGGATATTTGTCTGTGAAGACAGATGTTTTCAGTTATGGAATCTTGGTATTAGAAATTGTTAGTGGGAGAAAAAACCATGACCGGCTACTTGGTGAAGAGGAGGCAGATCTGTTGAGCTATGCATGGAAGCTATATCAGGCGGGAAAGATAATGGATTTAATTGACACAAGCCTCGCCAAATACAATGGTGACGAGGCAGCGATGTGCATTCAGCTGGGTTTGCTGTGCTGTCAAGCAAGTATATCAGAAAGACCTGATATGAATGCTGTTCATCTGATGCTCTCAAGTGATTCGTTCACTTTGCCAAGACCTGGTAAACCAGGAATTCAAGGCCGTGTAGGACGTTGGACTACGACCTCATTATCTGCTTTCACCAATACTAATGCTACTAGTGCGACCAAGGCTTCTGGGGGAACTAGTATGATAGACGACTATTCTAGAAATTCTATCTCTACTTCTTCCTTTGATGAAGGAAGATAA 1218 0.4392 MKVAVGEAAAEFVLLLQSMSFVFRLCPCLKRRFKANAASDSPHPQPPNDVADTWDLFFDLHTLQLATNFFSELNQLGHGGFGPVYKGLMPNGQEIAVKKLSLESRQGVREFTNEVKLLLRIQHKNLVTLYGCCAEGPEKMLVYEYLPNKSLDHFLFDKGKLPSLDWATRFRIVTGVARGLLYLHEEAPIRIIHRDIKASNILLDEKLSAKISDFGLARLFPGDDTHVQTFKISGTHGYMAPEYAMRGYLSVKTDVFSYGILVLEIVSGRKNHDRLLGEEEADLLSYAWKLYQAGKIMDLIDTSLAKYNGDEAAMCIQLGLLCCQASISERPDMNAVHLMLSSDSFTLPRPGKPGIQGRVGRWTTTSLSAFTNTNATSATKASGGTSMIDDYSRNSISTSSFDEGR 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2326 405 FunFam Cysteine-rich receptor-like protein kinase 2 39 145 - -
Prci9g2326 405 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 26 376 - -
Prci9g2326 405 Gene3D Transferase(Phosphotransferase) domain 1 146 346 - -
Prci9g2326 405 Gene3D Phosphorylase Kinase; domain 1 36 145 - -
Prci9g2326 405 SUPERFAMILY Protein kinase-like (PK-like) 48 340 IPR011009 -
Prci9g2326 405 Pfam Protein tyrosine and serine/threonine kinase 73 337 IPR001245 GO:0004672|GO:0006468
Prci9g2326 405 SMART serkin_6 70 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2326 405 FunFam Cysteine-rich receptor-like protein kinase 41 146 346 - -
Prci9g2326 405 CDD STKc_IRAK 76 340 - -
Prci9g2326 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Prci9g2326 405 ProSiteProfiles Protein kinase domain profile. 70 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2326 Prci-Chr9 32639303 32642458 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2326 28 357 Receptor kinase-like Gene Family AT4G11490 47.892 2.15e-110 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci9g2326 PK_Tyr_Ser-Thr 2.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2326 - - tpra:123884781 607.831