Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2324 ATGGCTAAGGAAGAGGAGCAGGTATTTCCGTTGCTTATCAAGAACTTCTCAGCAGACGAGCAGGCATCTCTAGTTTGGCAGTTTCTGTGCAGTATACCTGTCAATACAATGACAGAATTTCTTCCCTGGCTGTCAACATCTATATCACCGGATGAATCTACTGATCTGCAGAAGTGCTTAAGCAAGATAGTACCAGAAGAAAAGCTTCTTCAAAAGGTTATTTTCACTTGGATGGAAGGTAGAGGTGGTGTTAACGCAGTTGAAAGTTGTGGACATCATTCTCATGTTCAGTGTAGTCCTAGCCCATTAACCCATCTGATTGGGAAAGCAAACTGTGCATGTGAGTATGCGACAACTGGGAAACGGAAATATCCTGAATCTATTCTGGATGTTTCTGATGCTGCTGGAACACATCCTATTGATGAAATATTGCTCTGGCATAATGCTGTCAAAAAAGAGTTGAGTGAGATAGCGGTGGAGACCAGAAAGATACAGCTTTCAGGAAATTTTACTAATTTGTCAGCTTTTAATGAAAGGTTGCAGTTTATTGCTGAAGTTTGTGTATTTCACAGTATTGCTGAGGACAAGGTTATATTTCCTGCTGTAGATGGCGAGCTTTCTTTCTTTCAGGAGCATGCTGAAGAAGAAAGCCAGTTTAATGACTTCCGGTGTTTGATTGAAGGCATTCAGAGTGAAGGAGCAACATCCAATTCTGAAGCTGAATTTTATTCCAAGTTATGCTTATATGCTGATCATATAATGGAAACCATACAGAGGCATTTCCGCAATGAAGAAGTTCAGGTTCTTCCACTTGCTCGGAAGCACTTTAGCTTCAAAAAGCAACGCGAACTTTTGTACCAAAGCTTGTGCATGATGCCTTTAAAATTGATTGAACGTGTCCTGCCATGGTTGGTAGGATCATTAACTGAAGATGAAGCAAAGATGTTTTTGAAAAACATGCAACTAGCAGCTCCTCCAACAGATTCTGCTTTAGTCACTCTCTTCTGTGGTTGGGCTTGCAAGTCTCGGAAGGAGGGTCTGTGCTTGTCTTCAAGTGTATCAGGCTGCTGTCCTGCTAAAAATCTTGCTGATATTGAAGAAAATTGTTCGCAGTCATCCTGTGCTTGTTCTTGTGCATTATCTGCTAATGGTTGCTCAGTATCAGCTGAATCAGATGAGAACAAAAGGCCAGTCAAGCGAAACATATTGGAGTTCTGCAAGAATGGAGATGTCCCTGAAACTTCAGAAACTGAAAGTATCCAAGAGCAATGTTGTAATGCTCGGTCTTGTTGTGTGCCAGGTTTAGGAGTAAGCAGTAATAATCTGGGGCTGAGTTCTCATTCTACTACCAAGTCCTTGCGCTCCTTATCTTTCAGCTCTTCTCCCCCATCTCTGAATTCCAGTCTTTTCATATGGGAAACAGATCATAACTCTTGTGATGCTAGCTCTGCAGAAAGACCGATTGATACCATATTTAAATTCCATAAAGCTATACGCAAAGACTTGGAGTATTTAGATGTTGAATCTGGAAAGCTTAGTGATGGTGATGAGACAATTCTTCGTCAATTTGCTGGAAGATTTCGCCTTTTATGGGGCTTACATAGAGCTCACAGTAATGCTGAAGATGACATAGTTTTTCCAGCATTGGAATCCAAAGAGGCACTTCACAATGTGAGTCATTCATACACACTGGATCATAGGCAGGAAGAAAAATTATTTGAGGATGTATCCTGTGTTCTTTCTGAGCTTTCTGTTCTCCATGAAAATTTGCTGACACTCAATATGTCAGAGCATACAAGTAATTCTGAAATTTCTGATGCCACAGTGCGTGAGAATATAAGAAAATATAATGAGTTAGCAACTAAACTTCAAGGGATGTGCAAATCCATAAGAGTGACCCTAGATCAGCATATTTTCAGAGAAGAGCGTGAGCTTTGGCCATTGTTTGGGAGACATTTCACTGTGGAAGAACAAGACAAGATAGTTGGCCGGATAATTGGAACTACTGGTGCTGAAGTACTGCAGTCAATGTTACCATGGGTAACTTCTGCACTGACTCAGGATGAACAGAACAAAATGATGGACACATGGAAGCAGGCTACGAAGAACACTATGTTCAACGAATGGCTTAATGAATGCTGGAAAGAGAGTCCATCGTCCATCCCATTGACTGAAACATCAGAGCATAGCACTTCCCAAAGAGGTACTGAATATCAAGAAAGCTTGGACCTGAATGATCAGATTTTTAAGCCAGGTTGGAAAGATATATTTCGGATGAATCAGAGTGAGCTTGAGTTAGAGATACGGAAGGTTTATCGGGATTCTACTCTTGACCCTAGGAGAAAGGCATATCTTGTGCAAAATCTAATGACCAGTCGCTGGATTGCTTCCCAGCAGAAGTCACCCAAAGCTGTGGCTGGAGGATCCTCAAATGGTGAAGAAATAGAAGGAAGGACACCATCATTTCGGGATGTGGAGAAAAAAGAATTTGGATGTGAGCATTATAAGAGAAACTGCAAACTTCGAGCTGCATGTTGTGGGAAGTTATTTCCATGCAGATTTTGCCATGACAACGTGAGCGATCACTCAATGGACAGAAAAGCAACATTAGAAATGATGTGTATGCGCTGCTTGAATATACAAGTAGTTGGGCCCATATGCATGACCCCTTCATGTAATGGACTTTCAATGGCAAAATATTATTGCAACATCTGCAAATTTTTTGATGATGAAAGGATTGTATATCATTGCCCATTTTGCAATTTATGCCGTGTTGGGAAAGGGCTTGGAATTGATTATTTTCATTGTATGAAATGCAATTGTTGTCTGGGGATTAAAACAGCATCTCACAAATGCTTGGAGAAAGGCTTGGAAATGAACTGTCCAATTTGTTGTGACTTCTTATTCACATCCAGTGCTACAGTCAGAGCTCTACCTTGTGGCCATTATATGCATTCAGCTTGCTTTCAGGCATACACTTGTAGTCACTACACATGTCCAATCTGCAGCAAGTCTTTGGGAGATATGGCGTGGAAATTGAAATATGTAGGAGTAATAGCGATACAAAACGTACTTGGTTCTCTGCAAAACCAGGTTTACTTTGGCATGCTCGATGCCTTGTTGGCTGCTGAGGTGCTTCCTGAAGAGTACAAGGAACGGTATCAGGATATACTATGCAATGATTGTGATCGAAAGGGCTCTTCACGCTTCCACTGGTTATATCACAAATGTGGTTTCTGTGGCTCATACAATACCCGAGTGATCAAGTCTGAGTCAACAAATTCCATCTGCTCCTAG 3297 0.4119 MAKEEEQVFPLLIKNFSADEQASLVWQFLCSIPVNTMTEFLPWLSTSISPDESTDLQKCLSKIVPEEKLLQKVIFTWMEGRGGVNAVESCGHHSHVQCSPSPLTHLIGKANCACEYATTGKRKYPESILDVSDAAGTHPIDEILLWHNAVKKELSEIAVETRKIQLSGNFTNLSAFNERLQFIAEVCVFHSIAEDKVIFPAVDGELSFFQEHAEEESQFNDFRCLIEGIQSEGATSNSEAEFYSKLCLYADHIMETIQRHFRNEEVQVLPLARKHFSFKKQRELLYQSLCMMPLKLIERVLPWLVGSLTEDEAKMFLKNMQLAAPPTDSALVTLFCGWACKSRKEGLCLSSSVSGCCPAKNLADIEENCSQSSCACSCALSANGCSVSAESDENKRPVKRNILEFCKNGDVPETSETESIQEQCCNARSCCVPGLGVSSNNLGLSSHSTTKSLRSLSFSSSPPSLNSSLFIWETDHNSCDASSAERPIDTIFKFHKAIRKDLEYLDVESGKLSDGDETILRQFAGRFRLLWGLHRAHSNAEDDIVFPALESKEALHNVSHSYTLDHRQEEKLFEDVSCVLSELSVLHENLLTLNMSEHTSNSEISDATVRENIRKYNELATKLQGMCKSIRVTLDQHIFREERELWPLFGRHFTVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQDEQNKMMDTWKQATKNTMFNEWLNECWKESPSSIPLTETSEHSTSQRGTEYQESLDLNDQIFKPGWKDIFRMNQSELELEIRKVYRDSTLDPRRKAYLVQNLMTSRWIASQQKSPKAVAGGSSNGEEIEGRTPSFRDVEKKEFGCEHYKRNCKLRAACCGKLFPCRFCHDNVSDHSMDRKATLEMMCMRCLNIQVVGPICMTPSCNGLSMAKYYCNICKFFDDERIVYHCPFCNLCRVGKGLGIDYFHCMKCNCCLGIKTASHKCLEKGLEMNCPICCDFLFTSSATVRALPCGHYMHSACFQAYTCSHYTCPICSKSLGDMAWKLKYVGVIAIQNVLGSLQNQVYFGMLDALLAAEVLPEEYKERYQDILCNDCDRKGSSRFHWLYHKCGFCGSYNTRVIKSESTNSICS 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2324 1098 Pfam CHY zinc finger 832 907 IPR008913 GO:0008270
Prci9g2324 1098 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 956 1005 IPR013083 -
Prci9g2324 1098 ProSiteProfiles Zinc finger CHY-type profile. 825 894 IPR008913 GO:0008270
Prci9g2324 1098 Pfam Zinc-ribbon 1031 1086 IPR039512 -
Prci9g2324 1098 CDD Hr-like 489 647 - -
Prci9g2324 1098 SUPERFAMILY Zinc hairpin stack 898 954 IPR037275 -
Prci9g2324 1098 Pfam Hemerythrin HHE cation binding domain 487 648 IPR012312 -
Prci9g2324 1098 Pfam Hemerythrin HHE cation binding domain 138 272 IPR012312 -
Prci9g2324 1098 ProSiteProfiles Zinc finger CTCHY-type profile. 897 960 IPR017921 -
Prci9g2324 1098 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 530 1094 - -
Prci9g2324 1098 FunFam Zinc finger protein-related isoform 1 956 1005 - -
Prci9g2324 1098 MobiDBLite consensus disorder prediction 800 820 - -
Prci9g2324 1098 SUPERFAMILY CHY zinc finger-like 825 888 IPR037274 GO:0008270
Prci9g2324 1098 Gene3D nmb1532 protein domain like 141 288 - -
Prci9g2324 1098 Pfam Ring finger domain 960 1002 IPR001841 -
Prci9g2324 1098 Gene3D - 1053 1095 - -
Prci9g2324 1098 Gene3D nmb1532 protein domain like 481 720 - -
Prci9g2324 1098 SUPERFAMILY RING/U-box 958 1011 - -
Prci9g2324 1098 SMART ring_2 961 1002 IPR001841 -
Prci9g2324 1098 CDD Hr-like 141 270 - -
Prci9g2324 1098 ProSiteProfiles Zinc finger RING-type profile. 961 1003 IPR001841 -
Prci9g2324 1098 CDD RING-H2_Pirh2-like 960 1003 - -
Prci9g2324 1098 FunFam Zinc finger protein BRUTUS 482 712 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2324 Prci-Chr9 32618418 32628661 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2324 487 699 C2H2 Transcription Factor Family AT3G18290 28.169 1.71e-20 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2324 K16276 - gmx:100801725 1829.68