Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2321 ATGGCGACACCGTTGACGGGACTCCAGCATTTGGAAGGTAGAGGAGGAGTGCCTGTGCTCTCCAATTCTGTGAACAGCGTCGATTCCTCCTCGCCATCGACTTCGGCCTCCAATGGTGTCTTGAACTGCTCTGAGTTGGAGTCTCCAATCTTGATTTTCTTCTTGTTTCATAAGGCGATTCGAAATGAGCTTGATGCTCTTCACCGGTTGGCCATGGCATTTGCGACGGGCAACCGCGCTGATATTCAGCCACTCTTCGAGCGCTATCATTTCGTTAGATCCATTTATAGACACCACTCCAATGCTGAAGATGAGGTGATTTTTCCTGCTCTTGATATACGTGTGAAGAATGTGGCTCAAACATATTCTCTTGAACACAAGGGTGAAAGCAATCTGTTTGATCATCTATTTGAGCTGCTAAATTCTACCATCCAAAATGATGAAAGTTTTTCAAAGGAGTTAGCATCTTGCACAGGAGCTCTGCAAACATCAGTTAGTCAACACATGGCTAAGGAAGAGGAGCAGGTATTTCCGTTGCTTATCAAGAACTTCTCAGCAGACGAGCAGGCATCTCTAGTTTGGCAGTTTCTGTGCAGTATACCTGTCAATACAATGACAGAATTTCTTCCCTGGCTGTCAACATCTATATCACCGGATGAATCTACTGATCTGCAGAAGTGCTTAAGCAAGATAGTACCAGAAGAAAAGCTTCTTCAAAAGGTTATTTTCACTTGGATGGAAGGTAGAGGTGGTGTTAACGCAGTTGAAAGTTGTGGACATCATTCTCATGTTCAGTGTAGTCCTAGCCCATTAACCCATCTGATTGGGAAAGCAAACTGTGCATGTGAGTATGCGACAACTGGGAAACGGAAATATCCTGAATCTATTCTGGATGTTTCTGATGCTGCTGGAACACATCCTATTGATGAAATATTGCTCTGGCATAATGCTGTCAAAAAAGAGTTGAGTGAGATAGCGGTGGAGACCAGAAAGATACAGCTTTCAGGAAATTTTACTAATTTGTCAGCTTTTAATGAAAGGTTGCAGTTTATTGCTGAAGTTTGTGTATTTCACAGTATTGCTGAGGACAAGGTTATATTTCCTGCTGTAGATGGCGAGCTTTCTTTCTTTCAGGAGCATGCTGAAGAAGAAAGCCAGTTTAATGACTTCCGGTGTTTGATTGAAGGCATTCAGAGTGAAGGAGCAACATCCAATTCTGAAGCTGAATTTTATTCCAAGTTATGCTTATATGCTGATCATATAATGGAAACCATACAGAGGCATTTCCGCAATGAAGAAGTTCAGGTTCTTCCACTTGCTCGGAAGCACTTTAGCTTCAAAAAGCAACGCGAACTTTTGTACCAAAGCTTGTGCATGATGCCTTTAAAATTGATTGAACGTGTCCTGCCATGGTTGGTAGGATCATTAACTGAAGATGAAGCAAAGATGTTTTTGAAAAACATGCAACTAGCAGCTCCTCCAACAGATTCTGCTTTAGTCACTCTCTTCTGTGGTTGGGCTTGCAAGTCTCGGAAGGAGGGTCTGTGCTTGTCTTCAAGTGTATCAGGCTGCTGTCCTGCTAAAAATCTTGCTGATATTGAAGAAAATTGTTCGCAGTCATCCTGTGCTTGTTCTTGTGCATTATCTGCTAATGGTTGCTCAGTATCAGCTGAATCAGATGAGAACAAAAGGCCAGTCAAGCGAAACATATTGGAGTTCTGCAAGAATGGAGATGTCCCTGAAACTTCAGAAACTGAAAGTATCCAAGAGCAATGTTGTAATGCTCGGTCTTGTTGTGTGCCAGGTTTAGGAGTAAGCAGTAATAATCTGGGGCTGAGTTCTCATTCTACTACCAAGTCCTTGCGCTCCTTATCTTTCAGCTCTTCTCCCCCATCTCTGAATTCCAGTCTTTTCATATGGGAAACAGATCATAACTCTTGTGATGCTAGCTCTGCAGAAAGACCGATTGATACCATATTTAAATTCCATAAAGCTATACGCAAAGACTTGGAGTATTTAGATGTTGAATCTGGAAAGCTTAGTGATGGTGATGAGACAATTCTTCGTCAATTTGCTGGAAGATTTCGCCTTTTATGGGGCTTACATAGAGCTCACAGTAATGCTGAAGATGACATAGTTTTTCCAGCATTGGAATCCAAAGAGGCACTTCACAATGTGAGTCATTCATACACACTGGATCATAGGCAGGAAGAAAAATTATTTGAGGATGTATCCTGTGTTCTTTCTGAGCTTTCTGTTCTCCATGAAAATTTGCTGACACTCAATATGTCAGAGCATACAAGTAATTCTGAAATTTCTGATGCCACAGTGCGTGAGAATATAAGAAAATATAATGAGTTAGCAACTAAACTTCAAGGGATGTGCAAATCCATAAGAGTGACCCTAGATCAGCATATTTTCAGAGAAGAGCGTGAGCTTTGGCCATTGTTTGGGAGACATTTCACTGTGGAAGAACAAGACAAGATAGTTGGCCGGATAATTGGAACTACTGGTGCTGAAGTACTGCAGTCAATGTTACCATGGGTAACTTCTGCACTGACTCAGGATGAACAGAACAAAATGATGGACACATGGAAGCAGGCTACGAAGAACACTATGTTCAACGAATGGCTTAATGAATGCTGGAAAGAGAGTCCATCGTCCATCCCATTGACTGAAACATCAGAGCATAGCACTTCCCAAAGAGGTACTGAATATCAAGAAAGCTTGGACCTGAATGATCAGATTTTTAAGCCAGGTTGGAAAGATATATTTCGGATGAATCAGAGTGAGCTTGAGTTAGAGATACGGAAGGTTTATCGGGATTCTACTCTTGACCCTAGGAGAAAGGCATATCTTGTGCAAAATCTAATGACCAGTCGCTGGATTGCTTCCCAGCAGAAGTCACCCAAAGCTGTGGCTGGAGGATCCTCAAATGGTGAAGAAATAGAAGGAAGGACACCATCATTTCGGGATGTGGAGAAAAAAGAATTTGGATGTGAGCATTATAAGAGAAACTGCAAACTTCGAGCTGCATGTTGTGGGAAGTTATTTCCATGCAGATTTTGCCATGACAACGTGAGCGATCACTCAATGGACAGAAAAGCAACATTAGAAATGATGTGTATGCGCTGCTTGAATATACAAGTAGTTGGGCCCATATGCATGACCCCTTCATGTAATGGACTTTCAATGGCAAAATATTATTGCAACATCTGCAAATTTTTTGATGATGAAAGGATTGTATATCATTGCCCATTTTGCAATTTATGCCGTGTTGGGAAAGGGCTTGGAATTGATTATTTTCATTGTATGAAATGCAATTGTTGTCTGGGGATTAAAACAGCATCTCACAAATGCTTGGAGAAAGGCTTGGAAATGAACTGTCCAATTTGTTGTGACTTCTTATTCACATCCAGTGCTACAGTCAGAGCTCTACCTTGTGGCCATTATATGCATTCAGCTTGCTTTCAGGCATACACTTGTAGTCACTACACATGTCCAATCTGCAGCAAGTCTTTGGGAGATATGGCGTAG 3537 0.4167 MATPLTGLQHLEGRGGVPVLSNSVNSVDSSSPSTSASNGVLNCSELESPILIFFLFHKAIRNELDALHRLAMAFATGNRADIQPLFERYHFVRSIYRHHSNAEDEVIFPALDIRVKNVAQTYSLEHKGESNLFDHLFELLNSTIQNDESFSKELASCTGALQTSVSQHMAKEEEQVFPLLIKNFSADEQASLVWQFLCSIPVNTMTEFLPWLSTSISPDESTDLQKCLSKIVPEEKLLQKVIFTWMEGRGGVNAVESCGHHSHVQCSPSPLTHLIGKANCACEYATTGKRKYPESILDVSDAAGTHPIDEILLWHNAVKKELSEIAVETRKIQLSGNFTNLSAFNERLQFIAEVCVFHSIAEDKVIFPAVDGELSFFQEHAEEESQFNDFRCLIEGIQSEGATSNSEAEFYSKLCLYADHIMETIQRHFRNEEVQVLPLARKHFSFKKQRELLYQSLCMMPLKLIERVLPWLVGSLTEDEAKMFLKNMQLAAPPTDSALVTLFCGWACKSRKEGLCLSSSVSGCCPAKNLADIEENCSQSSCACSCALSANGCSVSAESDENKRPVKRNILEFCKNGDVPETSETESIQEQCCNARSCCVPGLGVSSNNLGLSSHSTTKSLRSLSFSSSPPSLNSSLFIWETDHNSCDASSAERPIDTIFKFHKAIRKDLEYLDVESGKLSDGDETILRQFAGRFRLLWGLHRAHSNAEDDIVFPALESKEALHNVSHSYTLDHRQEEKLFEDVSCVLSELSVLHENLLTLNMSEHTSNSEISDATVRENIRKYNELATKLQGMCKSIRVTLDQHIFREERELWPLFGRHFTVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQDEQNKMMDTWKQATKNTMFNEWLNECWKESPSSIPLTETSEHSTSQRGTEYQESLDLNDQIFKPGWKDIFRMNQSELELEIRKVYRDSTLDPRRKAYLVQNLMTSRWIASQQKSPKAVAGGSSNGEEIEGRTPSFRDVEKKEFGCEHYKRNCKLRAACCGKLFPCRFCHDNVSDHSMDRKATLEMMCMRCLNIQVVGPICMTPSCNGLSMAKYYCNICKFFDDERIVYHCPFCNLCRVGKGLGIDYFHCMKCNCCLGIKTASHKCLEKGLEMNCPICCDFLFTSSATVRALPCGHYMHSACFQAYTCSHYTCPICSKSLGDMA 1178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2321 1178 Pfam Ring finger domain 1128 1170 IPR001841 -
Prci9g2321 1178 SUPERFAMILY RING/U-box 1127 1174 - -
Prci9g2321 1178 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1124 1173 IPR013083 -
Prci9g2321 1178 ProSiteProfiles Zinc finger CHY-type profile. 993 1062 IPR008913 GO:0008270
Prci9g2321 1178 CDD Hr-like 309 438 - -
Prci9g2321 1178 MobiDBLite consensus disorder prediction 968 988 - -
Prci9g2321 1178 CDD RING-H2_Pirh2-like 1128 1171 - -
Prci9g2321 1178 SUPERFAMILY Zinc hairpin stack 1066 1122 IPR037275 -
Prci9g2321 1178 SMART ring_2 1129 1170 IPR001841 -
Prci9g2321 1178 Pfam Hemerythrin HHE cation binding domain 55 180 IPR012312 -
Prci9g2321 1178 Pfam Hemerythrin HHE cation binding domain 306 440 IPR012312 -
Prci9g2321 1178 Pfam Hemerythrin HHE cation binding domain 655 816 IPR012312 -
Prci9g2321 1178 Pfam CHY zinc finger 1000 1075 IPR008913 GO:0008270
Prci9g2321 1178 Gene3D nmb1532 protein domain like 309 456 - -
Prci9g2321 1178 Gene3D nmb1532 protein domain like 48 198 - -
Prci9g2321 1178 Gene3D nmb1532 protein domain like 649 888 - -
Prci9g2321 1178 ProSiteProfiles Zinc finger CTCHY-type profile. 1065 1128 IPR017921 -
Prci9g2321 1178 FunFam Zinc finger protein-related isoform 1 1124 1173 - -
Prci9g2321 1178 CDD Hr-like 52 178 - -
Prci9g2321 1178 ProSiteProfiles Zinc finger RING-type profile. 1129 1171 IPR001841 -
Prci9g2321 1178 SUPERFAMILY CHY zinc finger-like 993 1056 IPR037274 GO:0008270
Prci9g2321 1178 CDD Hr-like 657 815 - -
Prci9g2321 1178 FunFam Zinc finger protein BRUTUS 650 880 - -
Prci9g2321 1178 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 698 1177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2321 Prci-Chr9 32618049 32627095 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2321 1 1178 C2H2 Transcription Factor Family AT3G18290 66.248 0.0 1573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2321 K16276 - qsa:O6P43_005106 1947.55