Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2320 ATGGCGACACCGTTGACGGGACTCCAGCATTTGGAAGGTAGAGGAGGAGTGCCTGTGCTCTCCAATTCTGTGAACAGCGTCGATTCCTCCTCGCCATCGACTTCGGCCTCCAATGGTGTCTTGAACTGCTCTGAGTTGGAGTCTCCAATCTTGATTTTCTTCTTGTTTCATAAGGCGATTCGAAATGAGCTTGATGCTCTTCACCGGTTGGCCATGGCATTTGCGACGGGCAACCGCGCTGATATTCAGCCACTCTTCGAGCGCTATCATTTCGTTAGATCCATTTATAGACACCACTCCAATGCTGAAGATGAGGTGATTTTTCCTGCTCTTGATATACGTGTGAAGAATGTGGCTCAAACATATTCTCTTGAACACAAGGGTGAAAGCAATCTGTTTGATCATCTATTTGAGCTGCTAAATTCTACCATCCAAAATGATGAAAGTTTTTCAAAGGAGTTAGCATCTTGCACAGGAGCTCTGCAAACATCAGTTAGTCAACACATGGCTAAGGAAGAGGAGCAGGTATTTCCGTTGCTTATCAAGAACTTCTCAGCAGACGAGCAGGCATCTCTAGTTTGGCAGTTTCTGTGCAGTATACCTGTCAATACAATGACAGAATTTCTTCCCTGGCTGTCAACATCTATATCACCGGATGAATCTACTGATCTGCAGAAGTGCTTAAGCAAGATAGTACCAGAAGAAAAGCTTCTTCAAAAGGTTATTTTCACTTGGATGGAAGGTAGAGGTGGTGTTAACGCAGTTGAAAGTTGTGGACATCATTCTCATGTTCAGTGTAGTCCTAGCCCATTAACCCATCTGATTGGGAAAGCAAACTGTGCATGTGAGTATGCGACAACTGGGAAACGGAAATATCCTGAATCTATTCTGGATGTTTCTGATGCTGCTGGAACACATCCTATTGATGAAATATTGCTCTGGCATAATGCTGTCAAAAAAGAGTTGAGTGAGATAGCGGTGGAGACCAGAAAGATACAGCTTTCAGGAAATTTTACTAATTTGTCAGCTTTTAATGAAAGGTTGCAGTTTATTGCTGAAGTTTGTGTATTTCACAGTATTGCTGAGGACAAGGTTATATTTCCTGCTGTAGATGGCGAGCTTTCTTTCTTTCAGGAGCATGCTGAAGAAGAAAGCCAGTTTAATGACTTCCGGTGTTTGATTGAAGGCATTCAGAGTGAAGGAGCAACATCCAATTCTGAAGCTGAATTTTATTCCAAGTTATGCTTATATGCTGATCATATAATGGAAACCATACAGAGGCATTTCCGCAATGAAGAAGTTCAGGTTCTTCCACTTGCTCGGAAGCACTTTAGCTTCAAAAAGCAACGCGAACTTTTGTACCAAAGCTTGTGCATGATGCCTTTAAAATTGATTGAACGTGTCCTGCCATGGTTGGTAGGATCATTAACTGAAGATGAAGCAAAGATGTTTTTGAAAAACATGCAACTAGCAGCTCCTCCAACAGATTCTGCTTTAGTCACTCTCTTCTGTGGTTGGGCTTGCAAGTCTCGGAAGGAGGGTCTGTGCTTGTCTTCAAGTGTATCAGGCTGCTGTCCTGCTAAAAATCTTGCTGATATTGAAGAAAATTGTTCGCAGTCATCCTGTGCTTGTTCTTGTGCATTATCTGCTAATGGTTGCTCAGTATCAGCTGAATCAGATGAGAACAAAAGGCCAGTCAAGCGAAACATATTGGAGTTCTGCAAGAATGGAGATGTCCCTGAAACTTCAGAAACTGAAAGTATCCAAGAGCAATGTTGTAATGCTCGGTCTTGTTGTGTGCCAGGTTTAGGAGTAAGCAGTAATAATCTGGGGCTGAGTTCTCATTCTACTACCAAGTCCTTGCGCTCCTTATCTTTCAGCTCTTCTCCCCCATCTCTGAATTCCAGTCTTTTCATATGGGAAACAGATCATAACTCTTGTGATGCTAGCTCTGCAGAAAGACCGATTGATACCATATTTAAATTCCATAAAGCTATACGCAAAGACTTGGAGTATTTAGATGTTGAATCTGGAAAGCTTAGTGATGGTGATGAGACAATTCTTCGTCAATTTGCTGGAAGATTTCGCCTTTTATGGGGCTTACATAGAGCTCACAGTAATGCTGAAGATGACATAGTTTTTCCAGCATTGGAATCCAAAGAGGCACTTCACAATGTGAGTCATTCATACACACTGGATCATAGGCAGGAAGAAAAATTATTTGAGGATGTATCCTGTGTTCTTTCTGAGCTTTCTGTTCTCCATGAAAATTTGCTGACACTCAATATGTCAGAGCATACAAGTAATTCTGAAATTTCTGATGCCACAGTGCGTGAGAATATAAGAAAATATAATGAGTTAGCAACTAAACTTCAAGGGATGTGCAAATCCATAAGAGTGACCCTAGATCAGCATATTTTCAGAGAAGAGCGTGAGCTTTGGCCATTGTTTGGGAGACATTTCACTGTGGAAGAACAAGACAAGATAGTTGGCCGGATAATTGGAACTACTGGTGCTGAAGTACTGCAGTCAATGTTACCATGGGTAACTTCTGCACTGACTCAGGATGAACAGAACAAAATGATGGACACATGGAAGCAGGCTACGAAGAACACTATGTTCAACGAATGGCTTAATGAATGCTGGAAAGAGAGTCCATCGTCCATCCCATTGACTGAAACATCAGAGCATAGCACTTCCCAAAGAGGTACTGAATATCAAGAAAGCTTGGACCTGAATGATCAGATTTTTAAGCCAGGTTGGAAAGATATATTTCGGATGAATCAGAGTGAGCTTGAGTTAGAGATACGGAAGGTTTATCGGGATTCTACTCTTGACCCTAGGAGAAAGGCATATCTTGTGCAAAATCTAATGACCAGTCGCTGGATTGCTTCCCAGCAGAAGTCACCCAAAGCTGTGGCTGGAGGATCCTCAAATGGTGAAGAAATAGAAGGAAGGACACCATCATTTCGGGATGTGGAGAAAAAAGAATTTGGATGTGAGCATTATAAGAGAAACTGCAAACTTCGAGCTGCATGTTGTGGGAAGTTATTTCCATGCAGATTTTGCCATGACAACGTGAGCGATCACTCAATGGACAGAAAAGCAACATTAGAAATGATGTGTATGCGCTGCTTGAATATACAAGTAGTTGGGCCCATATGCATGACCCCTTCATGTAATGGACTTTCAATGGCAAAATATTATTGCAACATCTGCAAATTTTTTGATGATGAAAGGATTGTATATCATTGCCCATTTTGCAATTTATGCCGTGTTGGGAAAGGGCTTGGAATTGATTATTTTCATTGTATGAAATGCAATTGTTGTCTGGGGATTAAAACAGCATCTCACAAATGCTTGGAGAAAGGCTTGGAAATGAACTGTCCAATTTGTTGTGACTTCTTATTCACATCCAGTGCTACAGTCAGAGCTCTACCTTGTGGCCATTATATGCATTCAGCTTGCTTTCAGGCATACACTTGTAGTCACTACACATGTCCAATCTGCAGCAAGTCTTTGGGAGATATGGCGTGGAAATTGAAATATGTAGGAGTAATAGCGATACAAAACGTACTTGGTTCTCTGCAAAACCAGGTTTACTTTGGCATGCTCGATGCCTTGTTGGCTGCTGAGGTGCTTCCTGAAGAGTACAAGGAACGGTATCAGGATATACTATGCAATGATTGTGATCGAAAGGGCTCTTCACGCTTCCACTGGTTATATCACAAATGTGGTTTCTGTGGCTCATACAATACCCGAGTGATCAAGTCTGAGTCAACAAATTCCATCTGCTCCTAG 3801 0.4178 MATPLTGLQHLEGRGGVPVLSNSVNSVDSSSPSTSASNGVLNCSELESPILIFFLFHKAIRNELDALHRLAMAFATGNRADIQPLFERYHFVRSIYRHHSNAEDEVIFPALDIRVKNVAQTYSLEHKGESNLFDHLFELLNSTIQNDESFSKELASCTGALQTSVSQHMAKEEEQVFPLLIKNFSADEQASLVWQFLCSIPVNTMTEFLPWLSTSISPDESTDLQKCLSKIVPEEKLLQKVIFTWMEGRGGVNAVESCGHHSHVQCSPSPLTHLIGKANCACEYATTGKRKYPESILDVSDAAGTHPIDEILLWHNAVKKELSEIAVETRKIQLSGNFTNLSAFNERLQFIAEVCVFHSIAEDKVIFPAVDGELSFFQEHAEEESQFNDFRCLIEGIQSEGATSNSEAEFYSKLCLYADHIMETIQRHFRNEEVQVLPLARKHFSFKKQRELLYQSLCMMPLKLIERVLPWLVGSLTEDEAKMFLKNMQLAAPPTDSALVTLFCGWACKSRKEGLCLSSSVSGCCPAKNLADIEENCSQSSCACSCALSANGCSVSAESDENKRPVKRNILEFCKNGDVPETSETESIQEQCCNARSCCVPGLGVSSNNLGLSSHSTTKSLRSLSFSSSPPSLNSSLFIWETDHNSCDASSAERPIDTIFKFHKAIRKDLEYLDVESGKLSDGDETILRQFAGRFRLLWGLHRAHSNAEDDIVFPALESKEALHNVSHSYTLDHRQEEKLFEDVSCVLSELSVLHENLLTLNMSEHTSNSEISDATVRENIRKYNELATKLQGMCKSIRVTLDQHIFREERELWPLFGRHFTVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQDEQNKMMDTWKQATKNTMFNEWLNECWKESPSSIPLTETSEHSTSQRGTEYQESLDLNDQIFKPGWKDIFRMNQSELELEIRKVYRDSTLDPRRKAYLVQNLMTSRWIASQQKSPKAVAGGSSNGEEIEGRTPSFRDVEKKEFGCEHYKRNCKLRAACCGKLFPCRFCHDNVSDHSMDRKATLEMMCMRCLNIQVVGPICMTPSCNGLSMAKYYCNICKFFDDERIVYHCPFCNLCRVGKGLGIDYFHCMKCNCCLGIKTASHKCLEKGLEMNCPICCDFLFTSSATVRALPCGHYMHSACFQAYTCSHYTCPICSKSLGDMAWKLKYVGVIAIQNVLGSLQNQVYFGMLDALLAAEVLPEEYKERYQDILCNDCDRKGSSRFHWLYHKCGFCGSYNTRVIKSESTNSICS 1266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2320 1266 Pfam Zinc-ribbon 1199 1254 IPR039512 -
Prci9g2320 1266 Gene3D nmb1532 protein domain like 649 888 - -
Prci9g2320 1266 ProSiteProfiles Zinc finger CHY-type profile. 993 1062 IPR008913 GO:0008270
Prci9g2320 1266 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 698 1262 - -
Prci9g2320 1266 CDD Hr-like 309 438 - -
Prci9g2320 1266 MobiDBLite consensus disorder prediction 968 988 - -
Prci9g2320 1266 CDD RING-H2_Pirh2-like 1128 1171 - -
Prci9g2320 1266 SMART ring_2 1129 1170 IPR001841 -
Prci9g2320 1266 SUPERFAMILY Zinc hairpin stack 1066 1122 IPR037275 -
Prci9g2320 1266 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1124 1173 IPR013083 -
Prci9g2320 1266 Gene3D - 1221 1263 - -
Prci9g2320 1266 SUPERFAMILY CHY zinc finger-like 993 1056 IPR037274 GO:0008270
Prci9g2320 1266 ProSiteProfiles Zinc finger CTCHY-type profile. 1065 1128 IPR017921 -
Prci9g2320 1266 SUPERFAMILY RING/U-box 1126 1179 - -
Prci9g2320 1266 FunFam Zinc finger protein-related isoform 1 1124 1173 - -
Prci9g2320 1266 Pfam Ring finger domain 1128 1170 IPR001841 -
Prci9g2320 1266 CDD Hr-like 52 178 - -
Prci9g2320 1266 ProSiteProfiles Zinc finger RING-type profile. 1129 1171 IPR001841 -
Prci9g2320 1266 FunFam Zinc finger protein BRUTUS 650 880 - -
Prci9g2320 1266 CDD Hr-like 657 815 - -
Prci9g2320 1266 Gene3D nmb1532 protein domain like 48 198 - -
Prci9g2320 1266 Gene3D nmb1532 protein domain like 309 456 - -
Prci9g2320 1266 Pfam Hemerythrin HHE cation binding domain 306 440 IPR012312 -
Prci9g2320 1266 Pfam Hemerythrin HHE cation binding domain 55 180 IPR012312 -
Prci9g2320 1266 Pfam Hemerythrin HHE cation binding domain 655 816 IPR012312 -
Prci9g2320 1266 Pfam CHY zinc finger 1000 1075 IPR008913 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2320 Prci-Chr9 32618049 32628661 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2320 1 1266 C2H2 Transcription Factor Family AT3G18290 65.991 0.0 1678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2320 K16276 - qsa:O6P43_005106 2059.65