LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci9g2317	ATGGTGACCAAGCGGTTCTTTGATGACTCTGATCATGATCAAGACCCGGATGAGCCCCCTCACCAACGCACAAGACCCACTCTTGCTTCGGTGATTGGAGAAGTGGTTATGGCGAAAAACTTGCAGAACCTTCTCTCAGGCTTGGAACCTTTGCTCAGAAGGGTGGTGAGTGAGGAGGTGGAAGGAGTAATGAGACACATGTATCCTAGAACCATGACAAGGTCTGCATCGTTGAGGATACGAGCATCAGAGGAAGCACCGAACCTGCAACTGAGCTTTAAGGAAAAGCTGAGGCTCCCTATATTCACGGGAAGCAAAATACTGGATATTAATGGGAAGCCAATCCAGGTGGTTCTCGTAGACAAAAGTGGGGATCGAAGGGTTCCTACAAGTGTGCCTTATCCCATGAGGCTAGAAGTTGTGGTTCTCGATGGAGATTTCCCGCCTGCTGATAAGCAAGAATGGACCAGCGACGAATTCAACAACCACATAGTGAAGGAGAGAGCAGGAAAGCGACCCTTGCTCGCTGGAGAACTCAACATGACCGTGAGAAATGGCATCGCATGTTTGGGTGGGGACATTGAGTTTACGGATAACTCGAGTTGGATCAGGAGCAGGAAGTTCAGAGTTGCTGTCAAAGTGGTTCCTCAGACCAATCGAGGTCCTAGGATTCTCGAAGGCTTCACTGAATCTTTTGTCGTCAAGGATCATCGAGGCGAATTGTACAAAAAGCACCATCCACCAGTTTTGCAAGACGAAGTGTGGCGGCTAGAGAAGATCGGGAAGGATGGGGCATTTCACAAGAAGTTGTCCTCAGAGGGTATTAACAATGTTCAGGAGTTTCTCAAGCTGTCTGTGGTGGATCCTGCTAGACTCAGAGAGATATTAGGGATAGGGATGTCTGAGAAAATGTGGGAAGCGACGTTGAAGCATGCGAGGAGCTGTAAGATGGAGAAGAAGCTTTACGTATACCGTGGGCCTCAGTTTGCGGTGTTTCTGGATCCCATATGCCAAGTGGTCAGAGCTGATATCAATGGTCAGATCCTGCAAGACAGAGACCTCAACAACATGAATACGAGCTACATCGAGAAGCTGGTGAGAGAAGCATACGCCAGATGGGACACGTTGGAGGAAGCAGAGCCTGAAGGGCTTTTGAATGATAACAATTCCTTGTTAACTGATCAAGGGCAAGGGGAAACAGTAGTGGATCAAATTCCAGAAAGCCATCAAGTCAGTTGCGATCTCTTTGGAGATAACTCAATAGAAGCGGCCAACTTTGGACTGGGCAATGGTCAAGTGGCGGGAGGCAGTGAGTGGCCGACGTTGAATCCAGCATATCCTACGCTGCTTGGGAATGCCTGCCCTTTCAGCTTCTCAGAGTCACAATCAGATGTTGACAATATGACGCCTTCAGGATCTGTCATCCATGGACCCCCCAAGTGGCCCTGA	1449	0.4893	MVTKRFFDDSDHDQDPDEPPHQRTRPTLASVIGEVVMAKNLQNLLSGLEPLLRRVVSEEVEGVMRHMYPRTMTRSASLRIRASEEAPNLQLSFKEKLRLPIFTGSKILDINGKPIQVVLVDKSGDRRVPTSVPYPMRLEVVVLDGDFPPADKQEWTSDEFNNHIVKERAGKRPLLAGELNMTVRNGIACLGGDIEFTDNSSWIRSRKFRVAVKVVPQTNRGPRILEGFTESFVVKDHRGELYKKHHPPVLQDEVWRLEKIGKDGAFHKKLSSEGINNVQEFLKLSVVDPARLREILGIGMSEKMWEATLKHARSCKMEKKLYVYRGPQFAVFLDPICQVVRADINGQILQDRDLNNMNTSYIEKLVREAYARWDTLEEAEPEGLLNDNNSLLTDQGQGETVVDQIPESHQVSCDLFGDNSIEAANFGLGNGQVAGGSEWPTLNPAYPTLLGNACPFSFSESQSDVDNMTPSGSVIHGPPKWP	482

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci9g2317	482	PANTHER	OS02G0177800 PROTEIN	4	404	IPR012416	GO:0005516
	Prci9g2317	482	Pfam	Calmodulin binding protein C-terminal domain	320	378	IPR046829	-
	Prci9g2317	482	MobiDBLite	consensus disorder prediction	1	22	-	-
	Prci9g2317	482	Pfam	Calmodulin binding protein central domain	250	315	IPR046830	-
	Prci9g2317	482	MobiDBLite	consensus disorder prediction	460	482	-	-
	Prci9g2317	482	Pfam	Calmodulin binding protein-like N-terminal domain	89	237	IPR046831	-
	Prci9g2317	482	MobiDBLite	consensus disorder prediction	1	25	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci9g2317	Prci-Chr9	32582222	32585948	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci9g2317	3	386	Calmodulin-binding Proteins	AT5G57580	46.530	6.43e-112	343

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci9g2317	-		-	gmx:100802257	535.028