Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2315 ATGCAAGGCACCGGTTACTCTGCGTGTAATCACACTTACAATTGTGGGAATATCAATAACATCGCTTACCCTTTCTGGGGACAGAATCGACCCCCTTATGGCGGCTGCAGCAATCAATTCGAGCTCACCTGCCAAAATGATACCACCTTCATCACTGTCGGCCAACAAAAGTTCACGGTGGTCTCCATTAACCCAGAATTTTACTCCATGAAACTGGTGCAAACTGCTCTCTCCGTTTCTTGTCCCTGGAATTTCGCTAACACTTCCTTGGATCCTGCTCTCTTTCGCTTTGATAATTTAACAATTCAGAACTTGACCTTATTCCACGACTGCCCTCCTCGAGTCTCAAGCCCGGCCAACATCACTTGCCATCGTGGTCAAAAGGGTGAGGGCAGCGTTGCTTTTTTTGCGAAGCAAGACGAGAAGCAAAAACTGCAAACGTTTTCGAAATGTAAGGCTCGTAATCAGATTCTAGTTCAAGGTGGGATTTCGGATGTCGAAGACACGGGTGTGCTGAATAAATCTTTAAGGAATGGGTTCGTTGTTCAGTACGTTGCAAACTGGGATGCGTGCTTGGCATGCAATTCTTCGGGAGGAATATGTGGGGCTGACATCCATGATGCTTACCGATTTGCCTGTCACTGCCGGAACGGGATTCGTCGTCCTTATTCCTGTCCAAAAAAAAGACATTGGAACTGGAAAGGGAAACTCATAGCAGGTAATGGCTCCAAAGCTTCTTATTTTTCCCGCAACCGGCCAGGTGGTGCTGCTGCTTCATTCAGTGTGATAGTCATGAGCATTGGCCTCTATTTCTATCGGCGCCGAAAGAAGAATCGTCATGCAAAATCAGGCGAACAATCTCAGGGCCGGACCATATCTTCCGATTCCTCTATAAACGATGCTGAGAAAGGAAGTAAATACTTTGGAGTTCACCTCTTCACCTATACCGAACTTGAAGAGGCCACCAACAGCTTTGATTCAGCCAATGAACTTGGAGATGGGGGTTTTGGAACAGTTTATTGCGGAAAACTAGGCGATGGTCGCACAGTTGCGGTGAAGAGATTGTATGAAAACAATGGCAGGAGAGTTGAGCAGTTCATGAATGAAGTCGAGATCTTAACTCGTGTGCGCCACCAAAACCTTGTCCAACTTTATGGCTGCACTTCTCGCCATAGCCGTGAACTTCTGCTTGTATATGAATACATTCCTAACGGGACAGTTGCCGATCATCTTCACGGCCAAAGAGCAAAACCAGAGACACTCCCATGGCATACCAGAGTGAATATAGCCATAGAGACTGCGAGTGGATTGGCATATCTTCATGCATCTGACATCATCCACCGTGATATAAAAACCACCAACATCCTTCTGGACAATCATTTCGTTGTGAAAGTGGCAGATTTTGGACTTTCTCGTCTCTTCCCAAATGATGTCACTCACATTTCAACAGCCCCACAGGGAACTCCTGGGTATGTGGATCCAGAGTACCACCAGTGCTACCAACTAACTGACAAGAGTGATGTATATAGCTTTGGAGTGGTGTTTGTCCAGTTGATATCGTCAATGCCTGCTATTGATATCACCAGGCATAGGCATGAGATCAATTTGGCAGCCATGGCCATTAACAAGATTCAAAGCGGGAACTTGCATGATCTTGTGGATCCAACTCTTGGGTTTGAAGCAGATTCCAAGGTGAGGAAGATGATAAATGGAGTGGCAGAGTTGGCCTTCCGGTGCTTGCAGACTCTGAAAGATACGAGGCCTTGCATGGAAGAGGTGGTAGAAAGATTGAAGGAAATACAGAGTGATGGGACAGGTAAAACGAAAGCTGAGGAGATGGATATCTCAGCAGATCATGTTGTGTTGCTGAAGAACGAAGTGCCTCCACTGTCACCTGATTCAAATATGAGGAGCACGGCCACGACGCCAAATGCCAGCGAATAA 1944 0.4645 MQGTGYSACNHTYNCGNINNIAYPFWGQNRPPYGGCSNQFELTCQNDTTFITVGQQKFTVVSINPEFYSMKLVQTALSVSCPWNFANTSLDPALFRFDNLTIQNLTLFHDCPPRVSSPANITCHRGQKGEGSVAFFAKQDEKQKLQTFSKCKARNQILVQGGISDVEDTGVLNKSLRNGFVVQYVANWDACLACNSSGGICGADIHDAYRFACHCRNGIRRPYSCPKKRHWNWKGKLIAGNGSKASYFSRNRPGGAAASFSVIVMSIGLYFYRRRKKNRHAKSGEQSQGRTISSDSSINDAEKGSKYFGVHLFTYTELEEATNSFDSANELGDGGFGTVYCGKLGDGRTVAVKRLYENNGRRVEQFMNEVEILTRVRHQNLVQLYGCTSRHSRELLLVYEYIPNGTVADHLHGQRAKPETLPWHTRVNIAIETASGLAYLHASDIIHRDIKTTNILLDNHFVVKVADFGLSRLFPNDVTHISTAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVFVQLISSMPAIDITRHRHEINLAAMAINKIQSGNLHDLVDPTLGFEADSKVRKMINGVAELAFRCLQTLKDTRPCMEEVVERLKEIQSDGTGKTKAEEMDISADHVVLLKNEVPPLSPDSNMRSTATTPNASE 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2315 647 CDD STKc_IRAK 331 600 - -
Prci9g2315 647 FunFam Wall-associated receptor kinase-like 20 402 610 - -
Prci9g2315 647 MobiDBLite consensus disorder prediction 626 647 - -
Prci9g2315 647 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 7 644 IPR044652 GO:0004672
Prci9g2315 647 Gene3D Phosphorylase Kinase; domain 1 296 401 - -
Prci9g2315 647 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Prci9g2315 647 Pfam Protein kinase domain 327 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2315 647 SUPERFAMILY Protein kinase-like (PK-like) 303 597 IPR011009 -
Prci9g2315 647 FunFam WAK1-OsWAK receptor-like cytoplasmic kinase (OsWAK-RLCK) 297 401 - -
Prci9g2315 647 SMART serkin_6 325 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2315 647 MobiDBLite consensus disorder prediction 631 647 - -
Prci9g2315 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Prci9g2315 647 Gene3D Transferase(Phosphotransferase) domain 1 402 614 - -
Prci9g2315 647 Pfam Wall-associated receptor kinase C-terminal 137 217 IPR032872 -
Prci9g2315 647 ProSiteProfiles Protein kinase domain profile. 325 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2315 647 Pfam Wall-associated receptor kinase galacturonan-binding 9 73 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2315 Prci-Chr9 32574493 32581517 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2315 13 646 Receptor kinase-like Gene Family AT1G25390 42.489 5.23e-150 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Prci9g2315 Pkinase 4.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2315 - - qsa:O6P43_008550 700.279