Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2314 ATGCCGATCTTCTCCTTTATATCTCAGTGTTTCGTCCCCAGTGTAAGTAAAAACGATGCTTCGACCCCTAGTAATTGTGAGGGGAAAAGGAGTCAAATAGTGAGTGTGAATGTTGAGGTAACTAGCAACCGTTGCAGCCCGGTCCAATCGGTGCCTGTGGTTTCTGAGGTACCGATCAACCATGTTCGATCTGAGGTACTGAGCGGCCACGGCAGCAGAAATAAAATATTCAAGTATTCTGAACTTAAAATAGCCACCAACAATTTTGACTCCGACAGAGAGCTTGGGAGAGGAAAACATGGGACGGTATACCTTGGAATTCTTAAAGATGGGCATTCTGTTGCAATAAAGCAGTTGCATGAAGACAAGTTCAGGGCCCTAAGGTTACATGACGAGAAGCTCCACAGCGAGAAACTCGGAAAGTTCATGAGTGAAGTTTCAATGTTAACTTCTGTGAGCCATGAAAACCTTGTCCAACTATATGGCTGCATCTCTTCTCAAAGCAGTGAACTACTTCTAGTGCAAGAATACATGTCCAAAGGAAATCTCGCTAAATGTCTTCTTGATTCCCTGCTCCAACCTGGTACACTCCCCTGGCATATCCGATTAAATGTTGCCATACAAACAGCAAGTGCATTGGCTTATCTCCATTCTTGCAATATAATACACCGTGATGTGAAAAGCTGCAATATTCTTCTTGACCACAGCTTCAATGCTAAAGTTGCCGACTATGGATTGTCACACCTTTTCCCACTAGGTGTTACCCATATCACAACTGATCCTGATGGGACTCCTGGTTATATTGATCCAGAGTATTATGAGCGTTGCCATCTTTCTGATAAGAGTGATGTGTATAGCTATGGAGTAGTGCTGATTGAGCTAATATCATCCCAGCCAGCATTTTTTGAGGATTATGAACATCCCTGCCTTTCTGATTATGCCGTCAATAAAATCCGTGGCAGACAACTTGGAAGCCTTGTGGATCCTGCTCTTGGATTTGAATCAGATGACTGGATTACTCAATCAATTAATGCAGTGGCAGAGTTGGCATGTAGCTGTTTGCAACGCCACAGAGATAGGAGACCTTGCATGGAAGAAGTGTTGGATAGGCTTAAGAGCATTAGAAGTGCAAGAACTGGAACTTCTCTTTCCTGGGATCCAAACTGTTTGTAA 1173 0.4339 MPIFSFISQCFVPSVSKNDASTPSNCEGKRSQIVSVNVEVTSNRCSPVQSVPVVSEVPINHVRSEVLSGHGSRNKIFKYSELKIATNNFDSDRELGRGKHGTVYLGILKDGHSVAIKQLHEDKFRALRLHDEKLHSEKLGKFMSEVSMLTSVSHENLVQLYGCISSQSSELLLVQEYMSKGNLAKCLLDSLLQPGTLPWHIRLNVAIQTASALAYLHSCNIIHRDVKSCNILLDHSFNAKVADYGLSHLFPLGVTHITTDPDGTPGYIDPEYYERCHLSDKSDVYSYGVVLIELISSQPAFFEDYEHPCLSDYAVNKIRGRQLGSLVDPALGFESDDWITQSINAVAELACSCLQRHRDRRPCMEEVLDRLKSIRSARTGTSLSWDPNCL 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2314 390 SMART serkin_6 89 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2314 390 SUPERFAMILY Protein kinase-like (PK-like) 70 371 IPR011009 -
Prci9g2314 390 Gene3D Transferase(Phosphotransferase) domain 1 178 384 - -
Prci9g2314 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Prci9g2314 390 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 49 378 IPR044652 GO:0004672
Prci9g2314 390 Pfam Protein kinase domain 90 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2314 390 Gene3D Phosphorylase Kinase; domain 1 61 177 - -
Prci9g2314 390 ProSiteProfiles Protein kinase domain profile. 89 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2314 390 ProSitePatterns Protein kinases ATP-binding region signature. 95 117 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2314 Prci-Chr9 32569437 32572480 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2314 76 376 Receptor kinase-like Gene Family AT1G25390 49.342 1.06e-91 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Prci9g2314 Pkinase 3.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2314 - - tpra:123887372 417.927