Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2311 ATGCCTGATGCAGCAGAGGCTTCGGAATCTCAGCACTCCAAATGCACGAGGCCCAGGACCCAGTTCTCGCACCTCATTTCCCAAACTAATCCCGACCCACAAATCCCTTCTCTGCCCCACTCCACTCGCTGCAAATCCACCATTTCCTCTATCCTCTCTGCCTCCTCCCACGACGCTTGCGGTGAAACCGCACGACCCAACCTCAACACCAACAAGAAAAAGACCAATTTCTCAGCGGTAACCTTAAGAGGATTCGGATGCACTGCTGGCGCCTCGCGGCAGGTATCGCTTCCCGCTCTCATTCGGACATCGGCTGATTGGCAGCAAACCAAAGCCAGAAAAGAGAAGCACCGGAGGAGTGGTGCGAAGAACAGTGTGAACGGTCAAGGCGTCTTTGAAGGTTCAAATTCTGGTTCCGTTGGTTGCGTTGATTCTCAAGATGTTTGGTGTGGCCCTGGAATTGGATTTTCGGCGGACGTTGCTGCCCATGCGGATTGCGTTGTGGCAAGGAAGAATGGGCCTACGAGAGGGAAGACTGATTTGGAGAACATGACTCACAGCCACAGGGAGATGATGCTGCTTCAAGGAAGTCTGCTAATGGGGGGAAGATTGAATTCTCGCGACCACTTTAGAGACTGGAGACTCGATGTTGATAACATGTCTTATGAGCAATTGCTGGAGCTTGGTGAAAGAATTGGTTGTGTGAACACTGGACTTAAAGAAGACGAGATTAGACGTTGCATTAGGAAATTTAAGCTTTCCAAGTTTAACAAGACTTCAAAAAGTCAAGTTGAGAACAAGTGCAGCATTTGTCAGGAAGAATACGAAGCTGATGATGAGGTGGGAAGGCTGAGTTGTGAACACGACTATCACTTTCGGTGTTTAAGGCAATGGCTCGCGCAAAAAAATTGTTGCCCAGTGTGTAAGCAAGAAGTTGTTAGTCGTCACTCAGTAGCCAAATCCTGA 966 0.4917 MPDAAEASESQHSKCTRPRTQFSHLISQTNPDPQIPSLPHSTRCKSTISSILSASSHDACGETARPNLNTNKKKTNFSAVTLRGFGCTAGASRQVSLPALIRTSADWQQTKARKEKHRRSGAKNSVNGQGVFEGSNSGSVGCVDSQDVWCGPGIGFSADVAAHADCVVARKNGPTRGKTDLENMTHSHREMMLLQGSLLMGGRLNSRDHFRDWRLDVDNMSYEQLLELGERIGCVNTGLKEDEIRRCIRKFKLSKFNKTSKSQVENKCSICQEEYEADDEVGRLSCEHDYHFRCLRQWLAQKNCCPVCKQEVVSRHSVAKS 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2311 321 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 12 312 IPR045191 GO:0061630
Prci9g2311 321 Pfam Ring finger domain 266 309 IPR001841 -
Prci9g2311 321 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 243 318 IPR013083 -
Prci9g2311 321 ProSiteProfiles Zinc finger RING-type profile. 268 309 IPR001841 -
Prci9g2311 321 SMART ring_2 268 308 IPR001841 -
Prci9g2311 321 SUPERFAMILY RING/U-box 267 315 - -
Prci9g2311 321 FunFam E3 ubiquitin-protein ligase rnf12-A 235 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2311 Prci-Chr9 32555342 32558681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2311 1 223 C3H Transcription Factor Family AT1G73760 33.788 2.57e-30 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2311 - - pcin:129320004 647.506