Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci9g2303 | ATGTCAGACCTCGATCCGTCCAAGAAAGTGGCCGATAGATATCTCAAACGTGAAGTCCTTGGTGAAGGTACCTATGGAGTAGTATACAAAGCCATTGATACCCAGACAGGACAGACAGTTGCAATTAAGAAAATCCGGCTTGGCAAGCAGAAGGAAGGGGTAAATTTTACAGCCCTTCGAGAGATTAAAATACTTAAAGAGCTCAAAGATCCAAATATTATTGAGTTAATTGATTCTTTCCCACATAAAGGCAATTTGCATCTTGTCTTTGAATTCATGGAGACTGATCTTGAAGCTGTTATAAGAGACCGGAATATCTTTCTTTCACCAGCTGATATAAAATCTTACCTTCAAATGACTCTCCAAGGTCTTGCTTATTGCCACAAGAAATGGGTTTTGCATAGGGATATGAAACCAAACAACTTGCTGATAGGATCTAATGGACAGCTGAAACTTGCAGATTTTGGTTTAGCTCGAATCTTTGGGAGCCCAGACCGAAGATTTACTCATCAGGTAAGCAAGATCTTTGTTATATCACAAGAAAGGGGAAAAAAGATTGTCATGGGTTCAAGTGACATCGATCAATTAGGTAAGATTTTTGCAGCATTTGGGACGCCAGCTCCTTCTCAGTGGCTGGATATGGTATACCTACCTGACTATGTTGAGTACCAATATGTTCCTTCCCCGCCTTTTCGTTCTTTATTTCCAATGGCAAGTGATGATGCTTTAGATCTATTGTCGAAGATGTTTACCTATGATCCAAGAACTAGAATTTCAGCTGTGCAGGCATTAGACCACAGGTACTTTTCCTCAGCACCTCTGCCCACAGAACCAAGCAAACTTCCTAGACCTGCCCCTAAAAAGGAATCTAAGGTTTCTGATTTCAATCCACATGAGGGTCCTACTGTACTATCACCTCCAAGAAAGTCCAGGAGAGTGATGCCAGGACGTGATGGGTTTGAAGAAAATTCATTGCGAGGTGACAATGTTGGTGACTTCAGGCAGACTGCTGGTGATAATACTGGCAAGAGTGAACCAGCACCAATGTCAATAGATTTTTCTATCTTTGGATTGAAATCTCCAAACAGACCTACAATTAACAGTGCTGATAGATCACATTTAAAGAGAAAATTAGATCTAGAATTCCAGCAGCCAGAATGA | 1161 | 0.4091 | MSDLDPSKKVADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKIRLGKQKEGVNFTALREIKILKELKDPNIIELIDSFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMTLQGLAYCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARIFGSPDRRFTHQVSKIFVISQERGKKIVMGSSDIDQLGKIFAAFGTPAPSQWLDMVYLPDYVEYQYVPSPPFRSLFPMASDDALDLLSKMFTYDPRTRISAVQALDHRYFSSAPLPTEPSKLPRPAPKKESKVSDFNPHEGPTVLSPPRKSRRVMPGRDGFEENSLRGDNVGDFRQTAGDNTGKSEPAPMSIDFSIFGLKSPNRPTINSADRSHLKRKLDLEFQQPE | 386 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci9g2303 | 386 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 132 | 144 | IPR008271 | GO:0004672|GO:0006468 | |
Prci9g2303 | 386 | ProSiteProfiles | Protein kinase domain profile. | 14 | 269 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci9g2303 | 386 | FunFam | Cyclin-dependent kinase D-1 | 5 | 94 | - | - | |
Prci9g2303 | 386 | MobiDBLite | consensus disorder prediction | 369 | 386 | - | - | |
Prci9g2303 | 386 | ProSitePatterns | Protein kinases ATP-binding region signature. | 20 | 44 | IPR017441 | GO:0005524 | |
Prci9g2303 | 386 | MobiDBLite | consensus disorder prediction | 311 | 328 | - | - | |
Prci9g2303 | 386 | SMART | serkin_6 | 14 | 269 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci9g2303 | 386 | Gene3D | Phosphorylase Kinase; domain 1 | 5 | 94 | - | - | |
Prci9g2303 | 386 | CDD | STKc_CDK7 | 13 | 282 | IPR037770 | GO:0005675|GO:0008353|GO:0070985 | |
Prci9g2303 | 386 | MobiDBLite | consensus disorder prediction | 272 | 386 | - | - | |
Prci9g2303 | 386 | Gene3D | Transferase(Phosphotransferase) domain 1 | 95 | 181 | - | - | |
Prci9g2303 | 386 | Gene3D | Transferase(Phosphotransferase) domain 1 | 182 | 285 | - | - | |
Prci9g2303 | 386 | SUPERFAMILY | Protein kinase-like (PK-like) | 10 | 276 | IPR011009 | - | |
Prci9g2303 | 386 | Pfam | Protein kinase domain | 16 | 269 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci9g2303 | 386 | PANTHER | CELL DIVISION PROTEIN KINASE | 183 | 275 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci9g2303 | Prci-Chr9 | 32499451 | 32504131 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci9g2303 | 8 | 383 | Core Cell Cycle Gene Families | AT1G18040 | 66.085 | 0.0 | 515 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_CDK-CDK7 | Prci9g2303 | Pkinase | 4.5e-52 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci9g2303 | K02202 | - | qsa:O6P43_008518 | 643.654 |