Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2295 ATGGGTATCAAGGATCTCCTCCGATTCATGAAGCCCTATATCGAAACCATTCACATCAACAAATATGCCGGACAACGCGTGGGTATTGATGCTTATTCATGGCTTCATAAGGGAGCTTATTCCTGTAGTATGGAGCTTTGTCTCAATTCTGACACTGAAAAGAAGTTCCAATACATAGAGTACTTTATGCATCGAATCAAGCTACTTCGCTACTATAAGATAACGCCTGTTGTTGTTTTTGATGGCGGCAACGTTCCTTGCAAGGCAGCAACGGAGGAAGATAGGAAGAGAAAACGAAGTGCTAATCGTGATTTGGCAATGGCTAAGCTCAAAGAGGGGAACGTCAATGCAGCCTCGGAGTTATTTCAGAGGGCAGTGAACGTCACTCCCATCATGGCTTATCAACTGATTCAGGTTTTGAGATCAGAGAAAGTTGAGTTTGTTGTAGCTCCATACGAAGCAGATGCTCAGCTAGCATACATGTCCAAGATTAAAACAGGAAAGGGTGGTGTTGTAGCAGTGATCACCGAGGATAGTGACCTAATTGCCTACGGTTGTCCAGCTATTGTCTTTAAGATGGATCGTTATGGGAATGGTGAAAGCATAGAGTTGAACAAGGTTTTTAAAGCAGCGACTTGTAAACCATCCTTCCGAAATTTTGATATGGAACTTTTCACAGGCATGTCTGTCTTAGCTGGCTGTGACTTTCTTCCATCTGTTCCTGGAATTGGTATTGTGCGAGCTCATGCCTTAGTTTCCAAGTATCGGAATTTAGATCGTGTGTTATCTGTTCTCAAGTTGGAGAAGCGCAATCAAATGCCAGAAGATTACGCCAAATCCTTCAAAGAGGCAATTGCAGTCTTCCAGCATGCTCGAATATATGATCCCACTGCTAAGGAGCTCAAGCACCTTATGCCACTTCCACAAAACCTACTTCAGTCCTTTGACGGAAATCTTGATTTTTTGGGACCAGAAATTCCTCAAGTAATAGTTACCTCGATAGCAGAAGGCAACCTAAACCCGTCAACTAAGGAAGCCTTTGATAAGCTCGAACATTCCGGACTTCCTTTGGACCCCATTGTTCTCAAGAGCAATCGTCAACAACTGAAAGTCCAAGTTTCTGCAGCATTTACACAGGAGAGCTCCTTCAAAGTCTTTGGCTCCCATAATGCCAGAGAAAACAGTACAGTGACAAGGCCGAATCTGGTCCCGAGCAAAGACAAGTATTCTGGCGAAGCACTGGCACTTCAGAAACTTATTAGACCATTGGTAACTTGTGGAACGGTAGAAAAGGAAAACATTCCTCAAGAAACTCCACTGAAGGTTCCTGGCAACAACCCATTCAAGATAAGACCTGAGGAACTTTCCTTATTTCAGAGAGAGAACCCCGATGAACAAGTTCTTGCTGCCAAGAGTGAGGAATATATGGACGTGTGCATTTATTCAGAGAGCTTTCCGGAAGAGAGGCCTGAAAATCTCTCGAGAAAAAGGAAATTTCAGACCATTTGCTCAGATCAAACGGAAACATGTGATGATCAAATTTCAGCGGTGACTGTGATCGAAGAGGAAGATCCAGACATGTTTTGTGGGAACGTGAAATCCCAAGAGAGTGTAAATTCCAAGACAATAAAACTCACTGATTTGAAAAGAAGAGGTGCAAGTGAAAAGAAATCCAAGAAAAGCAGTGGCAGGGAAACAGGTAGCAAGAATAGCAGTATCTTGAATTTCTTTTCTCGGGTGTAA 1743 0.4303 MGIKDLLRFMKPYIETIHINKYAGQRVGIDAYSWLHKGAYSCSMELCLNSDTEKKFQYIEYFMHRIKLLRYYKITPVVVFDGGNVPCKAATEEDRKRKRSANRDLAMAKLKEGNVNAASELFQRAVNVTPIMAYQLIQVLRSEKVEFVVAPYEADAQLAYMSKIKTGKGGVVAVITEDSDLIAYGCPAIVFKMDRYGNGESIELNKVFKAATCKPSFRNFDMELFTGMSVLAGCDFLPSVPGIGIVRAHALVSKYRNLDRVLSVLKLEKRNQMPEDYAKSFKEAIAVFQHARIYDPTAKELKHLMPLPQNLLQSFDGNLDFLGPEIPQVIVTSIAEGNLNPSTKEAFDKLEHSGLPLDPIVLKSNRQQLKVQVSAAFTQESSFKVFGSHNARENSTVTRPNLVPSKDKYSGEALALQKLIRPLVTCGTVEKENIPQETPLKVPGNNPFKIRPEELSLFQRENPDEQVLAAKSEEYMDVCIYSESFPEERPENLSRKRKFQTICSDQTETCDDQISAVTVIEEEDPDMFCGNVKSQESVNSKTIKLTDLKRRGASEKKSKKSSGRETGSKNSSILNFFSRV 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2295 580 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 1 543 IPR006084 -
Prci9g2295 580 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 220 349 IPR036279 -
Prci9g2295 580 Gene3D - 218 291 - -
Prci9g2295 580 CDD H3TH_FEN1-like 223 295 - -
Prci9g2295 580 Gene3D - 1 213 - -
Prci9g2295 580 SMART xpgn3 1 102 IPR006085 GO:0004518
Prci9g2295 580 Pfam XPG I-region 144 235 IPR006086 GO:0004518
Prci9g2295 580 Pfam XPG N-terminal domain 1 100 IPR006085 GO:0004518
Prci9g2295 580 MobiDBLite consensus disorder prediction 543 564 - -
Prci9g2295 580 MobiDBLite consensus disorder prediction 565 580 - -
Prci9g2295 580 FunFam Exonuclease 1, putative 1 214 - -
Prci9g2295 580 SUPERFAMILY PIN domain-like 2 235 IPR029060 -
Prci9g2295 580 SMART xpgineu 141 222 IPR006086 GO:0004518
Prci9g2295 580 CDD PIN_EXO1 1 209 IPR044752 GO:0046872
Prci9g2295 580 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 140 157 IPR006084 -
Prci9g2295 580 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 76 95 IPR006084 -
Prci9g2295 580 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 24 38 IPR006084 -
Prci9g2295 580 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 225 240 IPR006084 -
Prci9g2295 580 MobiDBLite consensus disorder prediction 543 580 - -
Prci9g2295 580 FunFam exonuclease 1 218 291 - -
Prci9g2295 580 SMART HhH_4 222 255 IPR008918 GO:0003677|GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2295 Prci-Chr9 32471029 32475630 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2295 1 313 Core DNA Replication Machinery Family AT5G26680 26.911 1.09e-14 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2295 K10746 - gmx:100817932 743.806