Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2287 ATGAAGAACATTCTCAAGAAGCTCCATATCATGTCTAATCGATCAGAAGATGCGGCAGGATCTACTTCATCGAGAGGCCACAAGTCCAATGATGGTTCATTCCCCAAGAAGCCATCAAACTCTCGCTCCCCTCAAAATTCTGAGCATAAACCCTTTCCGGGGCTTTCGAGCTGGTTGCACTCGGTTGCTAACAGGCAGAGTCTTGGTCCTCCATCTTTGAATCTGAAAAAAGGAGAAAGAGTGGAACCATCTGATTTAGTTAGCAGTGGTGGTTTGGATATTGTTTCGGGTTCAGCGAGGCGTGATTCTGGGTCTAGCACTTCGAGGGATCCCGAAGTAGAGGAAGAATATCAGATACAATTGGCTTTAGAGATGAGTGCAAAGGAGGATCCCGAGGCAGTGCAGATTGAAGCTGTTAAGCAGATCAGTTTGGGCTCTTGTTGCCCTGATAATACACCAGCTGAAGTTGTGGCCTACAGATACTGGAATTACAATGCTATTGGTTATGATGATAAGATCTTGGATGGTTTCTATGATCTTTATGGGATCTTAAATGAGGCCCAATCAACCTCTGCAACAATGCCTTCCCTGGTGGATCTGCAAGGGACACCGACCTCAGATAGTGTCGCTTGGGAAGCAGTCTTGGTCAATAGGGCTGCTGATTCAAATTTATTGAAACTTGAGCAAAAAGCCCTGGAGCTGGCTGTCAAGTCAAGACCAAATTCTGAAGTAGTTATAAATAGTGATTCGGTGCAGAGGCTTGCCATATTAGTGGCAGACTATATGGGTGGACCGGTTACAGATCCTGAAAGCATGACAAGAGCATGGAAGAGTCTTAGTTACAGTCTGAAAGCAACTCTTGGTAGCATGGTTTTGCCGCTTGGTTCTCTGACCATTGGATTGGCTCGGCATCGAGCATTGTTGTTTAAGGTTTTATGTGATAGCATGGGCATCCCATGCTGCTTGGTCAAAGGACTACATTATACAGGTTCTGATGATGTGGCCATGAACTTTGTCAAGGTTGATGATGGAAGGGAATACATTGTTGACCTGATGGCAGATCCTGGAACACTTATTCCATCTGATGCAACTGGATCACATAACGAGTATGATGAATCTGTTTTTGTGGCCAGCCCTTTGTCAAGGGACCTTGATTCCTCCCATGTAGCATCATCTAGCAGCGGGATTGGAAGTTCATCTGAAGAAGCTTCAGACTTTGGTACATTTGATAAAAGAAACAGATCAAAACAGATTGCCTATTTGGGCAAAGAATCTTATATAAGCAGGCCCACTACCAGTGAAGACGAATCAAAGGGCCCATTGTTGATGCAGGAAGCTCCTGGTAGACCAAATTATCCCTACGTTCATGTAAGATCTCCTTCTTGGACCGAAGGGATCAGTTCCCCTGCAGTACGTAGAAGGAAAGTGAAAGATGTTTCACAATATATGATTGATGCTGCAATGGTGAATCCTCAATTAGCTCAAAAACTTCACGATGTTTTACTTGAAAGTGGTGTTGTTGCTCCTCCAAACTTATTTTCTGAAACTTATCACCAGCAGTTAGGTGCTCCAATTGTTGAGAATAACTCCAACACTGGGGAAAATGAATTTGAAGGGGAGAGTGGGAAACAGGAAGCTCAGCCTGATTCCCACCAAAGTCCTGCTCAATTCTTGCCTCCTTTGCCTCCCTACAGAGCTCATCTCAAAGCAATTCCTAGCAGTCAGCTTGAGCAATCCAAGCCTTTAGAAGGTCTAGGGATCAACCTTCCTTTTGATCATAGGGAAGTAGCTGGACAGCACTTGCTATCACATGCAGAAGCAACTCTTACAAGATATGGGAAGAATGTACCAGTTGCTGCAGCAGCAGCAGCTGTTGTTGCTTCATCAATGGTAGTTGCTGTGGCAAAGTCAAGCAATGACTCAAATATTGAGCTTCCTGTTGCAGCAGCTGCTACTGCTACTGCTGCAGCTGTAGTAGCAACCACTGCAGCTGTTGGTAAACAATGTGACCAGGGAAGTCGAAGTGATGGTGATTCAGATGGTGCTTTTCATGAGCAGGGGGTTAGCGATCATGGGGAGCATAGTGTTTTGGGAGAAAACACAGAAGGATCATACGGGGAGGTATACAGGGGTGAATGGCATGGAACTGAAGTAGCTGTAAAGAGATTTTTGGATCAAGACATCTCTGGTGAATCTCTTGAGGAATTCATAAGTGAGGTCCGAATAATGAAAAGGCTCAGGCATCCAAATGTTGTTCTCTTCATGGGAGCTGTAACCAAACCCCCAAATCTTTCAATTGTTACAGAATTTCTTGCCAGGGGAAGTTTGTATAGATTAATCCACCGGCCTAACAATCAATTAGACGAGCGAAGACGACTGAGGATGGCCCTGGATGCTGCGCGAGGAATGAACTACTTGCATAACTGCTCTCCAGTGATAGTCCATCGTGATTTGAAGTCTCCAAATCTTCTTGTTGACAAAAACTGGGTTGTAAAGGTATGCGACTTTGGTTTATCACGAATGAAGCACAGTACATTCCTTTCCTCGAGATCAACTGCAGGAACAGCAGAGTGGATGGCTCCAGAAATATTAAGAAATGAGCCTTCAAATGAAAAGTGTGATGTTTTCAGTTTTGGGGTCATATTATGGGAGCTCTCTACCATGCAGCAACCCTGGGGGGGAATGAATCCAATGCAAGTTGTTGGTGCTGTGGGTTTCCAACATCGCCGACTTGAAATCCCAGATGATATGGACCCTGACATTGCAGATATTATCAGAAAATGCTGGCAGACAGATCCAAAGTTGAGACCAAGCTTTGCCGAAATAATGGCAGCTCTGAAGCCATTGCAGAAGCCAATCATTAGTTCACAAGTGCAAAGGTCAAGTGCATCACGAGTTGCACAAGACCCAGCTGGATAG 2919 0.4478 MKNILKKLHIMSNRSEDAAGSTSSRGHKSNDGSFPKKPSNSRSPQNSEHKPFPGLSSWLHSVANRQSLGPPSLNLKKGERVEPSDLVSSGGLDIVSGSARRDSGSSTSRDPEVEEEYQIQLALEMSAKEDPEAVQIEAVKQISLGSCCPDNTPAEVVAYRYWNYNAIGYDDKILDGFYDLYGILNEAQSTSATMPSLVDLQGTPTSDSVAWEAVLVNRAADSNLLKLEQKALELAVKSRPNSEVVINSDSVQRLAILVADYMGGPVTDPESMTRAWKSLSYSLKATLGSMVLPLGSLTIGLARHRALLFKVLCDSMGIPCCLVKGLHYTGSDDVAMNFVKVDDGREYIVDLMADPGTLIPSDATGSHNEYDESVFVASPLSRDLDSSHVASSSSGIGSSSEEASDFGTFDKRNRSKQIAYLGKESYISRPTTSEDESKGPLLMQEAPGRPNYPYVHVRSPSWTEGISSPAVRRRKVKDVSQYMIDAAMVNPQLAQKLHDVLLESGVVAPPNLFSETYHQQLGAPIVENNSNTGENEFEGESGKQEAQPDSHQSPAQFLPPLPPYRAHLKAIPSSQLEQSKPLEGLGINLPFDHREVAGQHLLSHAEATLTRYGKNVPVAAAAAAVVASSMVVAVAKSSNDSNIELPVAAAATATAAAVVATTAAVGKQCDQGSRSDGDSDGAFHEQGVSDHGEHSVLGENTEGSYGEVYRGEWHGTEVAVKRFLDQDISGESLEEFISEVRIMKRLRHPNVVLFMGAVTKPPNLSIVTEFLARGSLYRLIHRPNNQLDERRRLRMALDAARGMNYLHNCSPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHSTFLSSRSTAGTAEWMAPEILRNEPSNEKCDVFSFGVILWELSTMQQPWGGMNPMQVVGAVGFQHRRLEIPDDMDPDIADIIRKCWQTDPKLRPSFAEIMAALKPLQKPIISSQVQRSSASRVAQDPAG 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2287 972 Gene3D Transferase(Phosphotransferase) domain 1 773 958 - -
Prci9g2287 972 PRINTS Tyrosine kinase catalytic domain signature 807 825 IPR001245 GO:0004672|GO:0006468
Prci9g2287 972 PRINTS Tyrosine kinase catalytic domain signature 917 939 IPR001245 GO:0004672|GO:0006468
Prci9g2287 972 PRINTS Tyrosine kinase catalytic domain signature 873 895 IPR001245 GO:0004672|GO:0006468
Prci9g2287 972 PRINTS Tyrosine kinase catalytic domain signature 768 781 IPR001245 GO:0004672|GO:0006468
Prci9g2287 972 PRINTS Tyrosine kinase catalytic domain signature 854 864 IPR001245 GO:0004672|GO:0006468
Prci9g2287 972 FunFam Serine/threonine-protein kinase isoform 1 694 772 - -
Prci9g2287 972 Gene3D Phosphorylase Kinase; domain 1 693 772 - -
Prci9g2287 972 FunFam Serine/threonine-protein kinase CTR1 773 956 - -
Prci9g2287 972 MobiDBLite consensus disorder prediction 1 116 - -
Prci9g2287 972 ProSitePatterns Serine/Threonine protein kinases active-site signature. 813 825 IPR008271 GO:0004672|GO:0006468
Prci9g2287 972 SMART serkin_6 694 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2287 972 MobiDBLite consensus disorder prediction 667 701 - -
Prci9g2287 972 Pfam Protein tyrosine and serine/threonine kinase 702 946 IPR001245 GO:0004672|GO:0006468
Prci9g2287 972 Pfam Ethylene-responsive protein kinase Le-CTR1 154 359 - -
Prci9g2287 972 ProSiteProfiles Protein kinase domain profile. 694 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2287 972 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 114 133 IPR003903 -
Prci9g2287 972 SUPERFAMILY Protein kinase-like (PK-like) 701 945 IPR011009 -
Prci9g2287 972 MobiDBLite consensus disorder prediction 15 52 - -
Prci9g2287 972 CDD STKc_MAP3K-like 702 946 - -
Prci9g2287 972 MobiDBLite consensus disorder prediction 526 559 - -
Prci9g2287 972 MobiDBLite consensus disorder prediction 386 408 - -
Prci9g2287 972 MobiDBLite consensus disorder prediction 426 447 - -
Prci9g2287 972 MobiDBLite consensus disorder prediction 673 697 - -
Prci9g2287 972 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 160 955 - -
Prci9g2287 972 MobiDBLite consensus disorder prediction 386 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2287 Prci-Chr9 32413564 32423478 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2287 1 960 MAP Kinase Kinase Kinase AT1G73660 62.242 0.0 1098
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Prci9g2287 PK_Tyr_Ser-Thr 2.2e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2287 - - gmx:100778331 1349.34