Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2276 ATGTGGATGGTGGGACATAACGATGGTGGTGAGGTCAATACGGTTGATCACCCATTCAATGGAAGGATGCTCAGGACTCTCATTCCAAGGCCGGTGACTTCTTCCAATAATACTTCAACTACAACTCCTCCTTGCCTAAGAAGTATTCACGGCTCCGATTTGTTTACACAATATCATCATCTGACATCGACGACGGATCAGAGTGAGAGAGAGTTCAATGCTCCACCAGTTATGGTGAGCTCGAGGTGGAATCCTACACCAGAGCAGCTAAGAGCCCTCGAAGAATTGTATCGGCGAGGAACAAGAACACCATCGGCTGAGGAAATCCAACATATCACTGCACAGCTGAGGAGATTCGGTAAAATTGAAGGGAAGAATGTTTTCTATTGGTTTCAGAATCACAAAGCCAGAGAAAGACAGAAACGGCGCCGTCAGATGGAATCAGCTCCCTGTGACTTTGATAGTCTAGAGAAAGAAGACTTGGGCGTAAGTAAGACAGTGTTTGAAGTTGAACGGACCAAGAACTGGGCACCCTCTACAAAATGCAGTACAGTTGCAGAGGAATCTGTTTCCATACCCAGAGCAACAAAAGCAGCGGTGGCTGAGCGAAGAACAGAAGGATGGATCCAATTCGATGAAGGGGAGTTACAGCAAGGAAGAAACTTAATGGAAAGGAATGCCACGTGGCAGATGATGCAGCCATCACGTCCTCCTCCCCCTCCTGCCGCTTCCACCCACCTCATAAACACCTCTACAGCTAGTTTAATTGCTTCCACAAGCACGGTAGCAATTGACTCAAAGCTCATTAAGGCACATGATCTCAGCTTCTTTATATCGCCTCACAGTGAAAGCACTGTGATCCACTTTAACAGTATCAGAGACCAGTTTGATAACTCTGGGGAACCTCAAACCCTTGAACTTTTCCCTCTAAGGAGTGGGGATGGCAGTGATAACGTCAACCATAAAGAGAGTGAGATTTCAGTTTCTGCAATGAATGCCAACTTGACCCCAAGCCAGTTCTTTGAGTTCCTTCCGTTGAAGAACTAA 1047 0.4642 MWMVGHNDGGEVNTVDHPFNGRMLRTLIPRPVTSSNNTSTTTPPCLRSIHGSDLFTQYHHLTSTTDQSEREFNAPPVMVSSRWNPTPEQLRALEELYRRGTRTPSAEEIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMESAPCDFDSLEKEDLGVSKTVFEVERTKNWAPSTKCSTVAEESVSIPRATKAAVAERRTEGWIQFDEGELQQGRNLMERNATWQMMQPSRPPPPPAASTHLINTSTASLIASTSTVAIDSKLIKAHDLSFFISPHSESTVIHFNSIRDQFDNSGEPQTLELFPLRSGDGSDNVNHKESEISVSAMNANLTPSQFFEFLPLKN 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2276 348 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 66 343 IPR044555 GO:0003700|GO:0099402
Prci9g2276 348 SUPERFAMILY Homeodomain-like 81 148 IPR009057 -
Prci9g2276 348 Gene3D - 78 141 - -
Prci9g2276 348 ProSiteProfiles 'Homeobox' domain profile. 86 141 IPR001356 GO:0003677
Prci9g2276 348 SMART HOX_1 78 145 IPR001356 GO:0003677
Prci9g2276 348 FunFam WUSCHEL-related homeobox 4 80 147 - -
Prci9g2276 348 Pfam Homeodomain 81 140 IPR001356 GO:0003677
Prci9g2276 348 CDD homeodomain 82 142 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2276 Prci-Chr9 32371478 32374111 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2276 1 348 Wox Gene Family AT3G18010 38.560 2.28e-59 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Prci9g2276 Homeodomain 1.1e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2276 - - gmx:100777274 472.626