Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2239 ATGCAGAATGAGGAGGGACAGATTACTGAACTTTACATTCCAAGGAAATGCTCTGCAACAAATAGATTGATAACGGCAAAGGACCATGCCTCCGTGCAGATTAACATTGGGCATTTGGACGAGAATGGTATCTACAATGGTCATTTCTCCACATTTGCTCTATGTGGTTTCATTCGTGCCCAGGTGGAAACAAGGGATGGCACGAAGGAAGATGATGATATTGTTGAGGTTTTGGAAACTGATTTCCCATGGCGATGTCACTGCCATTGCTGA 273 0.4396 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHLDENGIYNGHFSTFALCGFIRAQVETRDGTKEDDDIVEVLETDFPWRCHCHC 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2239 90 Pfam Ribosomal protein S21e 1 66 IPR001931 GO:0003735|GO:0005840|GO:0006412
Prci9g2239 90 Gene3D - 1 83 IPR038579 -
Prci9g2239 90 PANTHER 40S RIBOSOMAL PROTEIN S21 1 67 IPR001931 GO:0003735|GO:0005840|GO:0006412
Prci9g2239 90 ProSitePatterns Ribosomal protein S21e signature. 11 19 IPR018279 GO:0003735|GO:0005840|GO:0006412
Prci9g2239 90 FunFam 40S ribosomal protein S21 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2239 Prci-Chr9 32167387 32170909 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2239 1 67 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 79.104 5.74e-38 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2239 K02971 - gmx:100817753 127.487