Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2235 ATGATATGGATCACTCTCTCTGAAGCTTTGGTTCTGACTTCTGAGAGGGAGAAAGTGTGGCAAAGCAATCCATTAAGGAGATCAAGCATGCTTAGTCCTGAAGGAGAACTTCAAATTAGTTTTGGCTATCAATGTAATAGCAAAAGAGGTATCCCTTTTGAGGTTGCCAAAGGCAATAACATCCAACCCGAAGTTCACAGAACAAGCAGTTTCTCTTGCTTTTCTGGTGCAGCCTTGAGTGCAAATGCTACGTTAGCCAACACAAACATATGCAATGGTGTGATGGGGGAGGAAATACTCCCAACTTGGGACTCACCTAATTCATTCCGTAAGGTACCCTCTTCTCCAAGTCTTTCAAGGTTGGATATATTATCATCTTCTCTCCACAGTAATTTGTCAAACTTAAGTTGCAGTCCATCCACTCCAAGCGATATGCTTGATTATGAGTCTTGTACATTAAAATCCATGAGTGCTCCTTCCAGGAGTGAAGGTTTCCTTAATGCTATGGAAGTCCAAGTAGCAGGGGGAGCTGCTGGTGAAGATAGAGTCCAAGCAGTTTGTTCTGAAGAAAATGGCTGGCTCTTTTGTGCAGTTTATGATGGCTTTAATGGTAGAGATGCTGCGGACTTTCTGGCTGGTATTCTGTATGACACCATTGTATCTAACTTTAATATGCTGTGTTGGGACTTTGAGCCAGACTCCATTAAAGCTTATAATGATGTGGGTTTGAATAGATCCTATAAGTTGGATGATATTCTCATTGTTCATGAGGAGCAATCTCTATCAAAACTTGGGGGAAACAGCAGTTCTTATCTTGGCTGTTTGGCGAAGAATAGCCTACCTTCTAAGGTAGGAGCGCCTTATGAATCATTTTCAGATGGGGTCCTTGATAGCCTTGAACGCTCTCTTAGTCAGGTGGAGAATGATTTCTTGTACGTGGTTGAGCAGGAAATGGAGGAACGGCCAGATTTAGTTTCTGTTGGATCTTGTGTTTTACTAGTGCTTCTTCACGGGAATGACTTGTACACACTTAATTTAGGTGACAGCAGAGCAGTATTAGCAACAAGTAATACAAGTGGCAAACTCCAAGCTATCCAGCTCACAGAAAGTCATACGGTTGAAAATGAAGTTGAAAGAGCTCGACTTCTGGCTGATCACCCAGATGATCCTAAAGCCATTGTAGCAGGAAAAGTGAAAGGAAAACTGAAAGTCACTCGTGCTTTGGGAGTAGGTTACTTGAAGAAGAAATGTCTGAATGATGCACTGATGGGTATCCTTCGAGTCCGAGATCTTAGAAGCCCTCCATATATTTCCGCTCAACCATCACTGAACGTGCACAAGATCTCAAACTCTGATCAATTTGTGATAGTAGGAAGTGATGGCTTATTTGACTTCTTCAGCAATGATGAGGCCGTGGAGCTTGTTGAGTCTTATATCTTAAGCAATCCATTTGGCGATCCAGCTAAGTTTCTTATCGAGCAACTTTTAGCAAGAGCAGCCAATTCTGCAGGTTTCAGCATGGAAGAGTTGATGAATGTTCCGGCTGGGAGGAGGAGGAGGTATCATGATGACGTAACTGTGATTGTTATCATTCTTGGGATGAATCATCGGACTTCAAAGGCATCAACTTGCATCTAA 1638 0.4243 MIWITLSEALVLTSEREKVWQSNPLRRSSMLSPEGELQISFGYQCNSKRGIPFEVAKGNNIQPEVHRTSSFSCFSGAALSANATLANTNICNGVMGEEILPTWDSPNSFRKVPSSPSLSRLDILSSSLHSNLSNLSCSPSTPSDMLDYESCTLKSMSAPSRSEGFLNAMEVQVAGGAAGEDRVQAVCSEENGWLFCAVYDGFNGRDAADFLAGILYDTIVSNFNMLCWDFEPDSIKAYNDVGLNRSYKLDDILIVHEEQSLSKLGGNSSSYLGCLAKNSLPSKVGAPYESFSDGVLDSLERSLSQVENDFLYVVEQEMEERPDLVSVGSCVLLVLLHGNDLYTLNLGDSRAVLATSNTSGKLQAIQLTESHTVENEVERARLLADHPDDPKAIVAGKVKGKLKVTRALGVGYLKKKCLNDALMGILRVRDLRSPPYISAQPSLNVHKISNSDQFVIVGSDGLFDFFSNDEAVELVESYILSNPFGDPAKFLIEQLLARAANSAGFSMEELMNVPAGRRRRYHDDVTVIVIILGMNHRTSKASTCI 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2235 545 ProSiteProfiles PPM-type phosphatase domain profile. 165 532 IPR001932 -
Prci9g2235 545 PANTHER PROTEIN PHOSPHATASE 2C 173 530 IPR015655 GO:0004722|GO:0006470
Prci9g2235 545 CDD PP2Cc 178 532 IPR001932 -
Prci9g2235 545 Gene3D - 138 541 IPR036457 -
Prci9g2235 545 Pfam Protein phosphatase 2C 310 487 IPR001932 -
Prci9g2235 545 SUPERFAMILY PP2C-like 178 532 IPR036457 -
Prci9g2235 545 SMART PP2C_4 156 530 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2235 Prci-Chr9 32157409 32160768 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2235 33 545 PP2C-type Phosphatase Gene Family AT3G16560 63.391 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2235 - - gmx:100808304 785.408