Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2234 ATGAGATCAAGCATGCTTAGTCCTGAAGGAGAACTTCAAATTAGTTTTGGCTATCAATGTAATAGCAAAAGAGGTATCCCTTTTGAGGTTGCCAAAGGCAATAACATCCAACCCGAAGTTCACAGAACAAGCAGTTTCTCTTGCTTTTCTGGTGCAGCCTTGAGTGCAAATGCTACGTTAGCCAACACAAACATATGCAATGGTGTGATGGGGGAGGAAATACTCCCAACTTGGGACTCACCTAATTCATTCCGTAAGGTACCCTCTTCTCCAAGTCTTTCAAGGTTGGATATATTATCATCTTCTCTCCACAGTAATTTGTCAAACTTAAGTTGCAGTCCATCCACTCCAAGCGATATGCTTGATTATGAGTCTTGTACATTAAAATCCATGAGTGCTCCTTCCAGGAGTGAAGGTTTCCTTAATGCTATGGAAGTCCAAGTAGCAGGGGGAGCTGCTGGTGAAGATAGAGTCCAAGCAGTTTGTTCTGAAGAAAATGGCTGGCTCTTTTGTGCAGTTTATGATGGCTTTAATGGTAGAGATGCTGCGGACTTTCTGGCTGGTATTCTGTATGACACCATTGTATCTAACTTTAATATGCTGTGTTGGGACTTTGAGCCAGACTCCATTAAAGCTTATAATGATGTGGGTTTGAATAGATCCTATAAGTTGGATGATATTCTCATTGTTCATGAGGAGCAATCTCTATCAAAACTTGGGGGAAACAGCAGTTCTTATCTTGGCTGTTTGGCGAAGAATAGCCTACCTTCTAAGGTAGGAGCGCCTTATGAATCATTTTCAGATGGGGTCCTTGATAGCCTTGAACGCTCTCTTAGTCAGGTGGAGAATGATTTCTTGTACGTGGTTGAGCAGGAAATGGAGGAACGGCCAGATTTAGTTTCTGTTGGATCTTGTGTTTTACTAGTGCTTCTTCACGGGAATGACTTGTACACACTTAATTTAGGTGACAGCAGAGCAGTATTAGCAACAAGTAATACAAGTGGCAAACTCCAAGCTATCCAGCTCACAGAAAGTCATACGGTTGAAAATGAAGTTGAAAGAGCTCGACTTCTGGCTGATCACCCAGATGATCCTAAAGCCATTGTAGCAGGAAAAGTGAAAGGAAAACTGAAAGTCACTCGTGCTTTGGGAGTAGGTTACTTGAAGAAGAAATGTCTGAATGATGCACTGATGGGTATCCTTCGAGTCCGAGATCTTAGAAGCCCTCCATATATTTCCGCTCAACCATCACTGAACGTGCACAAGATCTCAAACTCTGATCAATTTGTGATAGTAGGAAGTGATGGCTTATTTGACTTCTTCAGCAATGATGAGGCCGTGGAGCTTGTTGAGTCTTATATCTTAAGCAATCCATTTGGCGATCCAGCTAAGTTTCTTATCGAGCAACTTTTAGCAAGAGCAGCCAATTCTGCAGGTTTCAGCATGGAAGAGTTGATGAATGTTCCGGCTGGGAGGAGGAGGAGGTATCATGATGACGTAACTGTGATTGTTATCATTCTTGGGATGAATCATCGGACTTCAAAGGCATCAACTTGCATCTAA 1563 0.4235 MRSSMLSPEGELQISFGYQCNSKRGIPFEVAKGNNIQPEVHRTSSFSCFSGAALSANATLANTNICNGVMGEEILPTWDSPNSFRKVPSSPSLSRLDILSSSLHSNLSNLSCSPSTPSDMLDYESCTLKSMSAPSRSEGFLNAMEVQVAGGAAGEDRVQAVCSEENGWLFCAVYDGFNGRDAADFLAGILYDTIVSNFNMLCWDFEPDSIKAYNDVGLNRSYKLDDILIVHEEQSLSKLGGNSSSYLGCLAKNSLPSKVGAPYESFSDGVLDSLERSLSQVENDFLYVVEQEMEERPDLVSVGSCVLLVLLHGNDLYTLNLGDSRAVLATSNTSGKLQAIQLTESHTVENEVERARLLADHPDDPKAIVAGKVKGKLKVTRALGVGYLKKKCLNDALMGILRVRDLRSPPYISAQPSLNVHKISNSDQFVIVGSDGLFDFFSNDEAVELVESYILSNPFGDPAKFLIEQLLARAANSAGFSMEELMNVPAGRRRRYHDDVTVIVIILGMNHRTSKASTCI 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2234 520 CDD PP2Cc 153 507 IPR001932 -
Prci9g2234 520 PANTHER PROTEIN PHOSPHATASE 2C 148 505 IPR015655 GO:0004722|GO:0006470
Prci9g2234 520 SMART PP2C_4 131 505 IPR001932 -
Prci9g2234 520 Pfam Protein phosphatase 2C 285 462 IPR001932 -
Prci9g2234 520 SUPERFAMILY PP2C-like 153 507 IPR036457 -
Prci9g2234 520 Gene3D - 113 516 IPR036457 -
Prci9g2234 520 ProSiteProfiles PPM-type phosphatase domain profile. 140 507 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2234 Prci-Chr9 32157409 32160982 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2234 8 520 PP2C-type Phosphatase Gene Family AT3G16560 63.391 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2234 - - gmx:100808304 785.408