Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2216 ATGAGGGTGCTGGTGGCAATAAAAGTTGTTCGAAGTATTAAGAAATACCGTGAAGCAGCAATGGTAGAAGTTGATGTGCTTCATTTACTTGGGAAGTATGACAGGAATGGCAGTCGCTGTGTTCAAATACAGAACTGGTTTGACTATCGTAACCATATTTGTATTGTATTTGAGATGCTTGGACCAAGCTTATATGATTTTCTACAGAAGAACAATTATCGCCCATTTCCGGTCGATCTTGTCCGTGAGCTAGGCAGACAACTGTTGGAATGTGTAGCATTTATGCATGATTTAGGTCTGATCCACACCGACTTGAAACCTGAGAACATACTTTTTGTTTCCCCAGAATATGTAAAAGTACCTGACTTCAAGGTTGCACCCCGGTCACCAAAAGAGGGAACCTTTTATAAGAGGCTGCCAAAGTCAAGCGCTATCAAGGTCATTGATTTTGGCAGCACAGCCTATGAACATCAAGGTCACAACTACATTGTCTCTACTAGGCATTATCGGGCACCTGAGGTTATTCTTGGGCTTGGGTGGAGTTTCCCTTGTGACATATGGAGTGTTGGATGCATTTTGGTTGAGTTATGCTCGGGAGAGGCTTTGTTTCAGACGCATGAGAATTTAGAGCACCTGGCCATGATGGAGAGGGTTTTAGGTCCAATGCCTATGCACGTGTTGAAAAGAGCAGACCGGCATGCAGAGAAGTTTGTCAGAAGGAGTAGACTGAACTGGCCAGAAGGGGCGGCCTCTCGAGAAAGTATCAAGGCTGTATTGAAGCTACCACGTCTTCCTAATCTAGTAATGCAGCATGTGGATCACTCTGCAGGCGATCTAATTGATCTCTTGCAAGGTCTTCTTTGTTTTGACCCCTCCAGTAGATTGACAGCTCATGAGGCGCTCCGGCACCCCTTCTTTACAAAGGAGCATTACCGCAGATTTTGA 945 0.4487 MRVLVAIKVVRSIKKYREAAMVEVDVLHLLGKYDRNGSRCVQIQNWFDYRNHICIVFEMLGPSLYDFLQKNNYRPFPVDLVRELGRQLLECVAFMHDLGLIHTDLKPENILFVSPEYVKVPDFKVAPRSPKEGTFYKRLPKSSAIKVIDFGSTAYEHQGHNYIVSTRHYRAPEVILGLGWSFPCDIWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPMPMHVLKRADRHAEKFVRRSRLNWPEGAASRESIKAVLKLPRLPNLVMQHVDHSAGDLIDLLQGLLCFDPSSRLTAHEALRHPFFTKEHYRRF 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2216 314 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 5 309 - -
Prci9g2216 314 SUPERFAMILY Protein kinase-like (PK-like) 4 310 IPR011009 -
Prci9g2216 314 Gene3D Phosphorylase Kinase; domain 1 4 59 - -
Prci9g2216 314 FunFam Serine/threonine-protein kinase AFC2 55 306 - -
Prci9g2216 314 CDD PKc_CLK 4 306 - -
Prci9g2216 314 ProSitePatterns Serine/Threonine protein kinases active-site signature. 100 112 IPR008271 GO:0004672|GO:0006468
Prci9g2216 314 Gene3D Transferase(Phosphotransferase) domain 1 33 306 - -
Prci9g2216 314 SMART serkin_6 3 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2216 314 Pfam Protein kinase domain 142 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2216 314 Pfam Protein kinase domain 5 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2216 314 ProSiteProfiles Protein kinase domain profile. 1 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2216 Prci-Chr9 32050693 32055398 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2216 51 310 MAP Kinase Gene Family AT4G01370 30.798 9.10e-25 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Prci9g2216 Pkinase 5e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2216 K08287 - mnt:21410276 587.8