Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2215 ATGTGTTATGGACAAGAGGTTGTGAATATGACAAGCTTTGGAGCAACAAGGATACTCCCTGACCATGCTGGCCTGTTTGTGAAGGGGTTGGCTGAAAAGGGTTCTCCCCCATGGCGAGATGATGACAAAGATGGACATTACATGTTCGCACTTGGTGACAATTTAACACCTCGATATAAGATCCTCCGAAAAATTGGTGAAGGTACTTTTGGTCAGGTTCTGGAATGTTGGGATAGAGAAATGAGGGTGCTGGTGGCAATAAAAGTTGTTCGAAGTATTAAGAAATACCGTGAAGCAGCAATGGTAGAAGTTGATGTGCTTCATTTACTTGGGAAGTATGACAGGAATGGCAGTCGCTGTGTTCAAATACAGAACTGGTTTGACTATCGTAACCATATTTGTATTGTATTTGAGATGCTTGGACCAAGCTTATATGATTTTCTACAGAAGAACAATTATCGCCCATTTCCGGTCGATCTTGTCCGTGAGCTAGGCAGACAACTGTTGGAATGTGTAGCATTTATGCATGATTTAGGTCTGATCCACACCGACTTGAAACCTGAGAACATACTTTTTGTTTCCCCAGAATATGTAAAAGTACCTGACTTCAAGGTTGCACCCCGGTCACCAAAAGAGGGAACCTTTTATAAGAGGCTGCCAAAGTCAAGCGCTATCAAGGTCATTGATTTTGGCAGCACAGCCTATGAACATCAAGGTCACAACTACATTGTCTCTACTAGGCATTATCGGGCACCTGAGGTTATTCTTGGGCTTGGGTGGAGTTTCCCTTGTGACATATGGAGTGTTGGATGCATTTTGGTTGAGTTATGCTCGGGAGAGGCTTTGTTTCAGACGCATGAGAATTTAGAGCACCTGGCCATGATGGAGAGGGTTTTAGGTCCAATGCCTATGCACGTGTTGAAAAGAGCAGACCGGCATGCAGAGAAGTTTGTCAGAAGGAGTAGACTGAACTGGCCAGAAGGGGCGGCCTCTCGAGAAAGTATCAAGGCTGTATTGAAGCTACCACGTCTTCCTAATCTAGTAATGCAGCATGTGGATCACTCTGCAGGCGATCTAATTGATCTCTTGCAAGGTCTTCTTTGTTTTGACCCCTCCAGTAGATTGACAGCTCATGAGGCGCTCCGGCACCCCTTCTTTACAAAGGAGCATTACCGCAGATTTTGA 1185 0.4481 MCYGQEVVNMTSFGATRILPDHAGLFVKGLAEKGSPPWRDDDKDGHYMFALGDNLTPRYKILRKIGEGTFGQVLECWDREMRVLVAIKVVRSIKKYREAAMVEVDVLHLLGKYDRNGSRCVQIQNWFDYRNHICIVFEMLGPSLYDFLQKNNYRPFPVDLVRELGRQLLECVAFMHDLGLIHTDLKPENILFVSPEYVKVPDFKVAPRSPKEGTFYKRLPKSSAIKVIDFGSTAYEHQGHNYIVSTRHYRAPEVILGLGWSFPCDIWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPMPMHVLKRADRHAEKFVRRSRLNWPEGAASRESIKAVLKLPRLPNLVMQHVDHSAGDLIDLLQGLLCFDPSSRLTAHEALRHPFFTKEHYRRF 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2215 394 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 30 389 - -
Prci9g2215 394 Gene3D Phosphorylase Kinase; domain 1 33 137 - -
Prci9g2215 394 SUPERFAMILY Protein kinase-like (PK-like) 46 390 IPR011009 -
Prci9g2215 394 FunFam Serine/threonine-protein kinase AFC2 135 386 - -
Prci9g2215 394 Pfam Protein kinase domain 59 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2215 394 ProSitePatterns Protein kinases ATP-binding region signature. 65 95 IPR017441 GO:0005524
Prci9g2215 394 CDD PKc_CLK 46 386 - -
Prci9g2215 394 SMART serkin_6 59 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2215 394 Gene3D Transferase(Phosphotransferase) domain 1 138 393 - -
Prci9g2215 394 ProSiteProfiles Protein kinase domain profile. 59 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2215 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2215 Prci-Chr9 32050693 32055705 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2215 59 386 Core Cell Cycle Gene Families AT1G76540 26.176 6.78e-27 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Prci9g2215 Pkinase 1.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2215 K08287 - qsa:O6P43_023145 726.472