Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2213 ATGGAGATGGACTACGTGACGGAGTTTCCGCACTCTCATGTGGATCGGCGTCCCAGGAAAAGGCCTAAATTAGCTTGGGAATTTCCTCAAACCCACTCCAAGGCTTATTCAGGGATGTGTTATGGACAAGAGGTTGTGAATATGACAAGCTTTGGAGCAACAAGGATACTCCCTGACCATGCTGGCCTGTTTGTGAAGGGGTTGGCTGAAAAGGGTTCTCCCCCATGGCGAGATGATGACAAAGATGGACATTACATGTTCGCACTTGGTGACAATTTAACACCTCGATATAAGATCCTCCGAAAAATTGGTGAAGGTACTTTTGGTCAGGTTCTGGAATGTTGGGATAGAGAAATGAGGGTGCTGGTGGCAATAAAAGTTGTTCGAAGTATTAAGAAATACCGTGAAGCAGCAATGGTAGAAGTTGATGTGCTTCATTTACTTGGGAAGTATGACAGGAATGGCAGTCGCTGTGTTCAAATACAGAACTGGTTTGACTATCGTAACCATATTTGTATTGTATTTGAGATGCTTGGACCAAGCTTATATGATTTTCTACAGAAGAACAATTATCGCCCATTTCCGGTCGATCTTGTCCGTGAGCTAGGCAGACAACTGTTGGAATGTGTAGCATGTCTGATCCACACCGACTTGAAACCTGAGAACATACTTTTTGTTTCCCCAGAATATGTAAAAGTACCTGACTTCAAGGTTGCACCCCGGTCACCAAAAGAGGGAACCTTTTATAAGAGGCTGCCAAAGTCAAGCGCTATCAAGGTCATTGATTTTGGCAGCACAGCCTATGAACATCAAGGTCACAACTACATTGTCTCTACTAGGCATTATCGGGCACCTGAGGTTATTCTTGGGCTTGGGTGGAGTTTCCCTTGTGACATATGGAGTGTTGGATGCATTTTGGTTGAGTTATGCTCGGGAGAGGCTTTGTTTCAGACGCATGAGAATTTAGAGCACCTGGCCATGATGGAGAGGGTTTTAGGTCCAATGCCTATGCACGTGTTGAAAAGAGCAGACCGGCATGCAGAGAAGTTTGTCAGAAGGAGTAGACTGAACTGGCCAGAAGGGGCGGCCTCTCGAGAAAGTATCAAGGCTGTATTGAAGCTACCACGTCTTCCTAATCTAGTAATGCAGCATGTGGATCACTCTGCAGGCGATCTAATTGATCTCTTGCAAGGTCTTCTTTGTTTTGACCCCTCCAGTAGATTGACAGCTCATGAGGCGCTCCGGCACCCCTTCTTTACAAAGGAGCATTACCGCAGATTTTGA 1284 0.4556 MEMDYVTEFPHSHVDRRPRKRPKLAWEFPQTHSKAYSGMCYGQEVVNMTSFGATRILPDHAGLFVKGLAEKGSPPWRDDDKDGHYMFALGDNLTPRYKILRKIGEGTFGQVLECWDREMRVLVAIKVVRSIKKYREAAMVEVDVLHLLGKYDRNGSRCVQIQNWFDYRNHICIVFEMLGPSLYDFLQKNNYRPFPVDLVRELGRQLLECVACLIHTDLKPENILFVSPEYVKVPDFKVAPRSPKEGTFYKRLPKSSAIKVIDFGSTAYEHQGHNYIVSTRHYRAPEVILGLGWSFPCDIWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPMPMHVLKRADRHAEKFVRRSRLNWPEGAASRESIKAVLKLPRLPNLVMQHVDHSAGDLIDLLQGLLCFDPSSRLTAHEALRHPFFTKEHYRRF 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2213 427 FunFam Serine/threonine-protein kinase AFC2 173 419 - -
Prci9g2213 427 SUPERFAMILY Protein kinase-like (PK-like) 84 423 IPR011009 -
Prci9g2213 427 Pfam Protein kinase domain 97 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2213 427 ProSiteProfiles Protein kinase domain profile. 97 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2213 427 Gene3D Phosphorylase Kinase; domain 1 71 175 - -
Prci9g2213 427 SMART serkin_6 97 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2213 427 ProSitePatterns Protein kinases ATP-binding region signature. 103 133 IPR017441 GO:0005524
Prci9g2213 427 Gene3D Transferase(Phosphotransferase) domain 1 176 426 - -
Prci9g2213 427 CDD PKc_CLK 84 419 - -
Prci9g2213 427 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 1 422 - -
Prci9g2213 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2213 Prci-Chr9 32050693 32055705 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2213 100 423 MAP Kinase Gene Family AT4G01370 29.499 2.19e-23 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Prci9g2213 Pkinase 1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2213 K08287 - qsa:O6P43_023145 769.229