Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2211 ATGGAGATGGACTACGTGACGGAGTTTCCGCACTCTCATGTGGATCGGCGTCCCAGGAAAAGGCCTAAATTAGCTTGGGAATTTCCTCAAACCCACTCCAAGGGGTTGGCTGAAAAGGGTTCTCCCCCATGGCGAGATGATGACAAAGATGGACATTACATGTTCGCACTTGGTGACAATTTAACACCTCGATATAAGATCCTCCGAAAAATTGGTGAAGGTACTTTTGGTCAGGTTCTGGAATGTTGGGATAGAGAAATGAGGGTGCTGGTGGCAATAAAAGTTGTTCGAAGTATTAAGAAATACCGTGAAGCAGCAATGGTAGAAGTTGATGTGCTTCATTTACTTGGGAAGTATGACAGGAATGGCAGTCGCTGTGTTCAAATACAGAACTGGTTTGACTATCGTAACCATATTTGTATTGTATTTGAGATGCTTGGACCAAGCTTATATGATTTTCTACAGAAGAACAATTATCGCCCATTTCCGGTCGATCTTGTCCGTGAGCTAGGCAGACAACTGTTGGAATGTGTAGCATTTATGCATGATTTAGGTCTGATCCACACCGACTTGAAACCTGAGAACATACTTTTTGTTTCCCCAGAATATGTAAAAGTACCTGACTTCAAGGTTGCACCCCGGTCACCAAAAGAGGGAACCTTTTATAAGAGGCTGCCAAAGTCAAGCGCTATCAAGGTCATTGATTTTGGCAGCACAGCCTATGAACATCAAGGTCACAACTACATTGTCTCTACTAGGCATTATCGGGCACCTGAGGTTATTCTTGGGCTTGGGTGGAGTTTCCCTTGTGACATATGGAGTGTTGGATGCATTTTGGTTGAGTTATGCTCGGGAGAGGCTTTGTTTCAGACGCATGAGAATTTAGAGCACCTGGCCATGATGGAGAGGGTTTTAGGTCCAATGCCTATGCACGTGTTGAAAAGAGCAGACCGGCATGCAGAGAAGTTTGTCAGAAGGAGTAGACTGAACTGGCCAGAAGGGGCGGCCTCTCGAGAAAGTATCAAGGCTGTATTGAAGCTACCACGTCTTCCTAATCTAGTAATGCAGCATGTGGATCACTCTGCAGGCGATCTAATTGATCTCTTGCAAGGTCTTCTTTGTTTTGACCCCTCCAGTAGATTGACAGCTCATGAGGCGCTCCGGCACCCCTTCTTTACAAAGGAGCATTACCGCAGATTTTGA 1203 0.453 MEMDYVTEFPHSHVDRRPRKRPKLAWEFPQTHSKGLAEKGSPPWRDDDKDGHYMFALGDNLTPRYKILRKIGEGTFGQVLECWDREMRVLVAIKVVRSIKKYREAAMVEVDVLHLLGKYDRNGSRCVQIQNWFDYRNHICIVFEMLGPSLYDFLQKNNYRPFPVDLVRELGRQLLECVAFMHDLGLIHTDLKPENILFVSPEYVKVPDFKVAPRSPKEGTFYKRLPKSSAIKVIDFGSTAYEHQGHNYIVSTRHYRAPEVILGLGWSFPCDIWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPMPMHVLKRADRHAEKFVRRSRLNWPEGAASRESIKAVLKLPRLPNLVMQHVDHSAGDLIDLLQGLLCFDPSSRLTAHEALRHPFFTKEHYRRF 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2211 400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Prci9g2211 400 MobiDBLite consensus disorder prediction 1 43 - -
Prci9g2211 400 SUPERFAMILY Protein kinase-like (PK-like) 52 396 IPR011009 -
Prci9g2211 400 Gene3D Phosphorylase Kinase; domain 1 39 143 - -
Prci9g2211 400 ProSiteProfiles Protein kinase domain profile. 65 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2211 400 FunFam Serine/threonine-protein kinase AFC2 141 392 - -
Prci9g2211 400 ProSitePatterns Protein kinases ATP-binding region signature. 71 101 IPR017441 GO:0005524
Prci9g2211 400 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 30 395 - -
Prci9g2211 400 SMART serkin_6 65 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2211 400 MobiDBLite consensus disorder prediction 1 27 - -
Prci9g2211 400 Pfam Protein kinase domain 65 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2211 400 Gene3D Transferase(Phosphotransferase) domain 1 144 399 - -
Prci9g2211 400 CDD PKc_CLK 52 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2211 Prci-Chr9 32050693 32055705 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2211 30 396 MAP Kinase Gene Family AT4G01370 28.912 7.04e-27 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Prci9g2211 Pkinase 1.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2211 K08287 - qsu:112037155 729.169