Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2208 ATGTTGGGTGAAGAGGGTAAGGACTGTTCCGACGGTGGCGGCGCTCGGAGAACATATTCGCGTTCTGTTTCTTGGACTGATCGGTCTCCGACGAACATTAGCCAAAACCGTCGGCCACCCACAAATAGTAAGCCCCGCCCATTGTTGCCTCCTCTTCAGCCTCTCTCCATCATGAAACGGAGTGCCGAGGAGTGGCCTAGCGCGGGATCTGATGATCTTGGAATTTGGCCTCTTCCACAAACCCCAAGAGGGTCCGTCAAAGCCTTGGAGAGTTCTGATTCGGGTCAACCCACAAAAGAATTTCAGTTCAAGAGGGATAAATTAGCGTTTTTTGACAAGGAGTGTTCCAGAATCGCGGAGCATATATATTTGGGAAGCGATACGGTGGCGAAGAATCACGAGCTTTTGAGGCGAAACGGGATCACTCATGTGCTCAACTGTGTTGGGTTTGTTTGTCCTGAGTATTTCAAAAGCGACTTTGTGTACAAGACACTTTGGCTGCAGGATAGCCCCACGGAGGATATCACCAGTATCCTCTACGACGTGTTTGATTACTTTGAGGATGTCCGGGAGCAACGCGGGCGTGTGCTTGTGCATTGTTGCCAGGGAGTTTCTCGTTCAACCTCTCTGGTCATTGCATATCTCATGTGGAGAGAAGGTCAGAGCTTTGAAGATGCGTTTCAGTATGTGAAGACTGCACGAGGAGTGACCAACCCAAATATGGGGTTTGCTTGTCAACTTCTGCAGTGTCAGAAACGTGTACTTGCTATGCCCGCAAGTCCAAATTCTATTCGTAGGATGTATCGAATGGCCCCTCACTCGCCCTATGACCCTCTTCATTTAGTCCCCAAAATGATAAACCATCCAGGTGCTCGAGCTCTTGATTCTCGAGGAGCGTTCATTATTCATGTTCCTTCTGCTATTTATGTGTGGAGTGGAAAAAATTGCAGTGCGGTGATGTCATGTAATGCAAGGGCTGCAGCATGTCAGGTCATCCGATATGAGAAGGCAAAGGGTCCGATTCAGAGCATCAAAGAAGGTGAAGAGCCCCTGGAGTTTTGGATTGCTCTTGCCAACGAGCAAATCTTGTCAGGCCATGAAAGCGTGGAGATCCCTGAAGCTGATACTAGCATGAGGATTGGTGGGAGAAAAGTTAGTGAATATGATTTGGATTTTGAAATTTTTCACAAGGCGCTTGCTGGCGGGGTTGTTCCACCTTTTTCTGTTTCTAGTGCCGGATCAGAAACTTGCTTACCTGCTAGAGAAAACGGTTGGAGTAGACTGAGGAGGAATTTTGCTCGTGGTATGATGAAAGGATTGTTCACATCATCCTGTAAATGGAACTGTGAAGTTACTATCACCAATTCTGCAGACGAAGAATGCTGTGTGATTATGCAAGAAGGAAACCAAGATTCTGTTGTTGATCCTGATTTGTCACCATCATCATCAATCTATCCCTGCGGTTCACCTGATTCTTTTGAATGTTTTCCAGATAACCGCTCAGACATGGCGAAGGATAGTACTATTGAAGTCATGGATCTCTCTGTTCCTCCCACTCCAGATTCTTTTTCTTGTTTCCTAAGCAACAGCCCAAAATTCAATTCCAAGTCCCCAACGCTCTCACCCTCCAGTTCTGATTATGCCAGTTCATTTACATTTTCACCCTCGTCTACAAATTGGTCTGACTTGTCGCTTGTGTCTTCTAGGCAGCCATCTCCTTCCAGCGTGGAACCAACTGACCCTTTTTATGCCAAAGAACTTTCTTTCTCAGAGAACTCTTCACCTCTCAAAGCTATTTCGCCGCCCAAGGAGGAGGCATTTTATGCCGATCACACATTGGGAGGGGTTGACACCTATTTGCCAAGTAAATGGTCCTCCCCTTCCCTTGCAGAGCGCAGAGGGAGTAATCCTCCACCTCGTATGTTGCTTCCCTCTGTCAACGAATCATCTCACGACCACACCAACCTGGGTGAGCAAAACAGTGCCCAGCAAGTCAAGCTTTGTGGAGATGGACAAACCATTGGAAATTGA 2031 0.4727 MLGEEGKDCSDGGGARRTYSRSVSWTDRSPTNISQNRRPPTNSKPRPLLPPLQPLSIMKRSAEEWPSAGSDDLGIWPLPQTPRGSVKALESSDSGQPTKEFQFKRDKLAFFDKECSRIAEHIYLGSDTVAKNHELLRRNGITHVLNCVGFVCPEYFKSDFVYKTLWLQDSPTEDITSILYDVFDYFEDVREQRGRVLVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKTARGVTNPNMGFACQLLQCQKRVLAMPASPNSIRRMYRMAPHSPYDPLHLVPKMINHPGARALDSRGAFIIHVPSAIYVWSGKNCSAVMSCNARAAACQVIRYEKAKGPIQSIKEGEEPLEFWIALANEQILSGHESVEIPEADTSMRIGGRKVSEYDLDFEIFHKALAGGVVPPFSVSSAGSETCLPARENGWSRLRRNFARGMMKGLFTSSCKWNCEVTITNSADEECCVIMQEGNQDSVVDPDLSPSSSIYPCGSPDSFECFPDNRSDMAKDSTIEVMDLSVPPTPDSFSCFLSNSPKFNSKSPTLSPSSSDYASSFTFSPSSTNWSDLSLVSSRQPSPSSVEPTDPFYAKELSFSENSSPLKAISPPKEEAFYADHTLGGVDTYLPSKWSSPSLAERRGSNPPPRMLLPSVNESSHDHTNLGEQNSAQQVKLCGDGQTIGN 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2208 676 PANTHER MKPA PROTEIN 7 655 - -
Prci9g2208 676 MobiDBLite consensus disorder prediction 556 577 - -
Prci9g2208 676 ProSiteProfiles Dual specificity protein phosphatase domain profile. 114 256 IPR020422 GO:0006470|GO:0008138
Prci9g2208 676 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 105 256 IPR029021 -
Prci9g2208 676 Gene3D Protein tyrosine phosphatase superfamily 87 255 IPR029021 -
Prci9g2208 676 MobiDBLite consensus disorder prediction 1 56 - -
Prci9g2208 676 MobiDBLite consensus disorder prediction 17 42 - -
Prci9g2208 676 MobiDBLite consensus disorder prediction 647 676 - -
Prci9g2208 676 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 183 234 IPR000387 GO:0016311|GO:0016791
Prci9g2208 676 SMART dsp_5 114 253 IPR020422 GO:0006470|GO:0008138
Prci9g2208 676 CDD DSP 115 249 - -
Prci9g2208 676 Gene3D Severin 267 363 IPR029006 -
Prci9g2208 676 ProSitePatterns Tyrosine specific protein phosphatases active site. 198 208 IPR016130 GO:0016311|GO:0016791
Prci9g2208 676 SUPERFAMILY Actin depolymerizing proteins 260 359 - -
Prci9g2208 676 MobiDBLite consensus disorder prediction 622 676 - -
Prci9g2208 676 MobiDBLite consensus disorder prediction 556 579 - -
Prci9g2208 676 Pfam Dual specificity phosphatase, catalytic domain 122 252 IPR000340 GO:0008138|GO:0016311
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2208 Prci-Chr9 32038455 32044744 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2208 1 150 Protein tyrosine phosphatase (PTP) family AT3G55270 42.162 7.95e-32 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2208 - - qsa:O6P43_023149 865.529