Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2200 ATGGCCGCCCATTCTTCATTTTTTCCCGATACTCACGATTCTTCATCTTTGAAGAGGAAGAGGCCTCTCAGGATTCTGATCCCAGATTTATTGCAAGAAATCCAGACACCCAAGCTCAATGACTCCAAGGCATTGGAGGACGACGTTTGTTTTAGCGGACTTGGTTTTGGGGTTCTTTCTGTAAAAGGCAAGAAATTGTGCATGGAAGATGCTCACAAGATTGTTTCTTCTTTAGAGAGCAACCCGAAAAAAGGCTTCTTTGGCGTCTACGATGGGCATGGTGGGAGGAAGGCCGCAGAGTTTGTCGTCGAGAACTTACACGCTAATATTCTCAAAATGGTGGAGAATTGTTTAGAGTCAAGGGCCAAGGAGGAAGCCGTTAAAGCTGGGTATCTAAAGACAGACGAAGAATTTTTGAAAAAGGGTATAGGAAGCGGTGCCTGTTGCGTGACAGCCCTGATCCAAGGGAAAGAGATTGTTGTTTCAAACGTGGGAGATTGCAGGGCAGTTCTTTGCAGAGGTGGAGTGGCCGAAGTTCTCACAAGAGATCACAGAGTGGAACTAGAAGATGAACGGAGAAGAATTGAGGAAAAGGGAGGATACGTGGAGATCCATCGAGGAGCTTGGAGAATTCATGGGGTACTCTCTGTTTCTAGAAGCATTGGGGATGCTCATCTAAAGGAGTGGGTGGTGGCTGAGCCCGATACCAAGATTCTGCCATTAACTGCGGATATGGAGTTTCTTGTGTTGGCTTCTGATGGACTGTGGGAAGAGGTTGGTAACCAAGAAGCCGTTGATACTGTGACACGTTTATGTCGGAATGAAGAGAAGCTAGGCTCCTTGGGAGATGAACAGAATGATGTTGATGATGACTATGGTCAAGTAAACGTAAGTCCGTCATTGAGGCTACGAAGAGTTTCACTTGTGAAGCAGTCGAGCGGCCATAAAAAGACATTGAATGGCTTGAATGAAGTTGGGGAAGATGATTTTCGTTGTGAAAATGAAAGCCCCCCATCGAAATCACGCAGAATTTCATCGGCGAAGCGAGTGTTTATTAAAAAAGAGACACCAGTAAAACCAATCAAAGTGTGCAAGAAAAGTGCAACCTCTGGACTTCTGCCCGCTTGCAAGGAGCTTGTGAACCTTGCCGTGGGAAGGGGGACTTTGGATGATATTACTGTAATGATAATTGATTTAAAACACTACATGTGTAACATCTAA 1221 0.4521 MAAHSSFFPDTHDSSSLKRKRPLRILIPDLLQEIQTPKLNDSKALEDDVCFSGLGFGVLSVKGKKLCMEDAHKIVSSLESNPKKGFFGVYDGHGGRKAAEFVVENLHANILKMVENCLESRAKEEAVKAGYLKTDEEFLKKGIGSGACCVTALIQGKEIVVSNVGDCRAVLCRGGVAEVLTRDHRVELEDERRRIEEKGGYVEIHRGAWRIHGVLSVSRSIGDAHLKEWVVAEPDTKILPLTADMEFLVLASDGLWEEVGNQEAVDTVTRLCRNEEKLGSLGDEQNDVDDDYGQVNVSPSLRLRRVSLVKQSSGHKKTLNGLNEVGEDDFRCENESPPSKSRRISSAKRVFIKKETPVKPIKVCKKSATSGLLPACKELVNLAVGRGTLDDITVMIIDLKHYMCNI 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2200 406 SMART PP2C_4 41 397 IPR001932 -
Prci9g2200 406 SUPERFAMILY PP2C-like 53 400 IPR036457 -
Prci9g2200 406 PANTHER PROTEIN PHOSPHATASE 2C 46 398 IPR015655 GO:0004722|GO:0006470
Prci9g2200 406 Pfam Protein phosphatase 2C 56 273 IPR001932 -
Prci9g2200 406 CDD PP2Cc 55 278 IPR001932 -
Prci9g2200 406 ProSitePatterns PPM-type phosphatase domain signature. 86 94 IPR000222 GO:0043169
Prci9g2200 406 Gene3D - 52 403 IPR036457 -
Prci9g2200 406 ProSiteProfiles PPM-type phosphatase domain profile. 55 399 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2200 Prci-Chr9 32015073 32017187 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2200 15 402 PP2C-type Phosphatase Gene Family AT1G67820 54.061 1.11e-131 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2200 - - pcin:129320141 812.372