Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2193 ATGAAGAGAGAGATCAGGAAAGTTCCAAAATGGGGAAACAAGGGAGCGGTGAGGATGGATGCCAGCAGGCAACATCAGTGTGGCGGCCGGGGTGCCCCATCGCATTCTTCGCCACGTGTTAACACTTCCTCCGTGTCCGCCATCCTCTCCCTTATTTATATCTCTCAGCCATCTGCTGAGAATCAATGTATCAACGCCGTGGGGCTGCTTCCGGTGCTGGTCATCAACACCGTCGTACCAGTGGCTCTCCTGAAGAACATCCTCAGGTCTCTTCTCCAACTGGTCGGTGCCGCCTGTGCCTATTCTACTGACCCTGACGACGATGACCAATGCTCTGTTGCCAGAAGGAGGGTGTCCATTACTCAGTACAAGTTCATGACTGACTCCGCCATGGCGGACTGCTGCGTCTGTCTGTGTGCTTTCCAAGGCAGCGAAGAGGTGAGTGAGCTGTCTGGCGAGCATTTCTTTCACACAGCTTGCTTGGACAAGTGGTTCCTTAACAGACACACCACGTGCCCTCTCTGTCGTTCCGCTTCTTAG 540 0.5407 MKREIRKVPKWGNKGAVRMDASRQHQCGGRGAPSHSSPRVNTSSVSAILSLIYISQPSAENQCINAVGLLPVLVINTVVPVALLKNILRSLLQLVGAACAYSTDPDDDDQCSVARRRVSITQYKFMTDSAMADCCVCLCAFQGSEEVSELSGEHFFHTACLDKWFLNRHTTCPLCRSAS 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2193 179 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 112 179 IPR013083 -
Prci9g2193 179 PANTHER - 68 177 IPR044249 -
Prci9g2193 179 Pfam Ring finger domain 133 176 IPR001841 -
Prci9g2193 179 ProSiteProfiles Zinc finger RING-type profile. 134 176 IPR001841 -
Prci9g2193 179 MobiDBLite consensus disorder prediction 21 40 - -
Prci9g2193 179 SUPERFAMILY RING/U-box 133 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2193 Prci-Chr9 31998836 32000023 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2193 68 177 C3H Transcription Factor Family AT2G04240 28.148 8.66e-13 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2193 K16285 - twl:120000147 137.117