Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2173 ATGGAACGGTATGATATAATCAAAGATATTGGGTCAGGGAACTTTGGCGTGGCAAAGCTGGTGAGAGAGAAACGTAGTGGTGACTTATATGCTATCAAGTTTATTGAGCGAGGCACAAAGATTGATGAGCATGTGCAAAGGGAGATCATAAACCATAGGTCCTTGAAGCATCCCAATATCATTAGATTCAAAGAGGTGTTGCTCACTCCGACCCATCTTGCCATAGTGATGGAATATGCCGCTGGAGGAGAACTCTTTGAAAGAATATGCAATGCGGGCAGATTCAGCGAAGATGAGGCAAGGTATTTCTTTCAGCAGTTGATTTCTGGAGTCAGCTATTGTCATTCAATGGAAATTTGCCACAGAGATCTTAAGCTAGAAAACACACTCTTAGATGGAAGCGCTGCACCAAGGCTCAAAGTTTGCGACTTTGGCTACTCAAAGTCATCTGTTCTGCACTCTCAGCCCAAATCTACTGTAGGAACCCCTGCTTATATTGCGCCAGAGGTTTTGTCACGAAGAGAATATGATGGAAAGGTTGCAGATGTTTGGTCTTGTGGCGTGACCTTGTATGTCATGCTGGTTGGTGCTTATCCTTTTGAAGATCATGAAGATCCTAAGAACTTCAGAAAAACACTTCAGAGAATTCTCAGCGTCCACTATTCTGTACCGGACTATGTTCGTATTTCAAAAGAGTGTAAACACCTTCTATCTAGAATATTTGTGGCCGACCCGGAGAAGAGAATTACGATCCCAGAAATTAAAATGCACCCGTGGTTCCTGAAGAACTTGCCGCTAGAATTCATGGACGAAGGAAGACAAAGTGGGGTGCGGGAAGATGAAGTGAACGATTCGTGCGAGTGGCAGAGCATCGAAGAAATATCGAGTATAATCCAAAACGCTCGAAAAGCAGGGGATCAAGGCCAAAAAGTTGGTGGGCAGTTTGTTGGGATTGGAAGCATGGATCTTGATGAGATGGATACTGATGCTGACATCGATGATTTCGAGACAAGCGGTGATTTTGTCTGTGCTTTGTGA 1038 0.4393 MERYDIIKDIGSGNFGVAKLVREKRSGDLYAIKFIERGTKIDEHVQREIINHRSLKHPNIIRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGSAAPRLKVCDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRREYDGKVADVWSCGVTLYVMLVGAYPFEDHEDPKNFRKTLQRILSVHYSVPDYVRISKECKHLLSRIFVADPEKRITIPEIKMHPWFLKNLPLEFMDEGRQSGVREDEVNDSCEWQSIEEISSIIQNARKAGDQGQKVGGQFVGIGSMDLDEMDTDADIDDFETSGDFVCAL 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2173 345 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2173 345 FunFam Serine/threonine-protein kinase SRK2E 80 268 - -
Prci9g2173 345 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Prci9g2173 345 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2173 345 FunFam Serine/threonine-protein kinase SRK2E 1 79 - -
Prci9g2173 345 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Prci9g2173 345 CDD STKc_SnRK2 3 259 - -
Prci9g2173 345 PANTHER SERINE/THREONINE KINASE 2 289 - -
Prci9g2173 345 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2173 345 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Prci9g2173 345 Gene3D Transferase(Phosphotransferase) domain 1 80 267 - -
Prci9g2173 345 SUPERFAMILY Protein kinase-like (PK-like) 2 266 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2173 Prci-Chr9 31874378 31877696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2173 3 270 CBL-interacting serine-threonine protein kinases AT4G24400 42.599 9.09e-69 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Prci9g2173 Pkinase 3.5e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2173 K14498 - gmx:100807981 603.594