Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2165 ATGGAGGACGAGGAGCACGAGGTGTACGGAGGCGAGATCCCTGATGTTGGCGAGATGGAAGGGGACTTGGATTCTCACAATGCCGACGTCGACATGTCAGCTGCCGACGATGAAGCTGTCAAGGAACTGGACGAGATGAAGAAGCGATTGAAGGAGATGGAAGAGGAGGCCGCAGCTCTCCGAGAGATGCAGGCCAAGGTCGAGAAGGAGATGGGAGCGGTTCAAGATCCTGCTAGTGCAGTTGCTTCTCAAGCGAACAAGGAGGAGGTGGATTCTCGATCTGTTTTTGTTGGCAATGTTGATTACGCATGCACACCAGAAGAAGTGCAGCAGCACTTCCAATCATGTGGTACAGTAAACAGAGTCACTATATTGACTGACAAGTATGGCCAACCTAAGGGATTTGCTTATGTGGAATTTCTTGAAACTGAAGCTGTTCAAGAGGCTCTTCTTTTGAATGAATCCGAATTGCATGGCCGTCAGTTGAAGGTTTTACTTAAGAGGACCAACGTTCCTGGCATGAAACAGTATCGTCCTAGGCGTTTCAATCCTTACCTGGCATACCGCTTTAGGAGGCCATATCCTCCTCCTTACTTCTACTCCGCTTATGGATATGGGAAGTTTCCCAGGTTTAGGAGGCCAGGCCGATACATGCCTTACTATTAG 666 0.491 MEDEEHEVYGGEIPDVGEMEGDLDSHNADVDMSAADDEAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPASAVASQANKEEVDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKYGQPKGFAYVEFLETEAVQEALLLNESELHGRQLKVLLKRTNVPGMKQYRPRRFNPYLAYRFRRPYPPPYFYSAYGYGKFPRFRRPGRYMPYY 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2165 221 CDD RRM_II_PABPs 94 165 - -
Prci9g2165 221 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 31 179 - -
Prci9g2165 221 Coils Coil 36 70 - -
Prci9g2165 221 FunFam Polyadenylate-binding protein 1 32 165 - -
Prci9g2165 221 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 95 163 IPR000504 GO:0003723
Prci9g2165 221 Gene3D - 21 176 IPR012677 -
Prci9g2165 221 SUPERFAMILY RNA-binding domain, RBD 84 188 IPR035979 GO:0003676
Prci9g2165 221 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 93 169 IPR000504 GO:0003723
Prci9g2165 221 MobiDBLite consensus disorder prediction 1 28 - -
Prci9g2165 221 SMART rrm1_1 94 165 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2165 Prci-Chr9 31837072 31841526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2165 94 166 Eukaryotic Initiation Factors Gene Family AT2G36660 33.784 2.31e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2165 K14396 - tcc:18611531 359.377