Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2161 ATGCTTCGGCTAATCAACTTACTGACTGGAATCAAAATCAATTCATTAGCATTGATGGGATTTACTGGGTTCTTGACCCCAAGAATTGGGGCTCTAAAAAGCCTTGCAACTCTTTCATTGCAAGGGAATGGCATCACCGGTGAAATACCAAAAGAATTAGGGAATCTGACTAGCTTAATCAGATTGGATCTGGAAAACAATAGATTAACAGGACAAATACCGTCTACCCTTGGTAATCTTAAAAGGCTTCAGTTCTTGACTTTGAGTCAAAACCATCTCAGCGGGAATATTCCTGAATCACTTGGCAGTCTTCCTAGCTTGATCAATGCTCTGCTGGACTCAAATAATCTCAGCGGTCGAATTCCTGAACAGTTATTTGATGTTCCTAAATACAATTTCAGTGGAAATAAGTTAAATTGTGATATGAATTACCGCCACCCTTGTGCCTCTGATAATGCAGATCAAGGTTCATCACATAAGCCGAAAATTGGCCTTATAGTCGGAATTATTGTTGGGTTAATTGTTGTAATTTTTCTCGGTGGTCTGCTGTTCTTCTGGTGTAAGAGTAGACGCAAGGGCTACAGACGAGAAGTTTTTGTGGATGTTGCAGGTGAAGTTGATCGGCGAATTGCATTTGGTCAACTGAAAAGATTTGCTTGGAGAGAACTACAGATAGCCACGGACAACTTCAGTGAAAAAAATGTTCTAGGACAGGGAGGCTTTGGAAAAGTTTATAAAGGTGTTCTTGCTGATAACGCTAAAGTTGCTGTCAAAAGGTTAACTGATTATGAAAGTCCTGGGGGAGATGCTGCTTTCCAGAGGGAAGTTGAGATGATAAGTGTAGCTGTTCATCGGAACCTGTTACGGTTGATTGGGTTTTGTACTACTCCAACTGAACGTCTTCTAGTTTATCCCTTCATGCAGAATTTAAGTGTTGCCTATAGACTAAGAGAACTGAAACCTGGAGAACCTGTTTTAGATTGGCCAACAAGAAAAAGAGTGGCTTTAGGCACAGCCCGTGGCCTAGAATATCTTCATGAGCATTGCAATCCTAAGATTATTCATCGGGATGTGAAGGCTGCAAATGTATTACTAGATGAAGATTTTGAGGCAGTTGTTGGTGACTTTGGTTTGGCGAAGTTAGTTGATGTTCGAAAAACTAATGTGACAACTCAAGTTCGTGGGACAATGGGTCACATAGCTCCTGAGTACTTGTCCACTGGGAAATCTTCTGAAAGGACAGATGTTTTTGGTTATGGCATTATGCTTTTGGAGCTTGTTACAGGTCAACGGGCAATTGACTTTTCTCGTTTGGAAGAGGAAGATGATGTGTTGTTACTTGACCATGTTAAGAAACTAGAAAGGGAAAAGCGTCTAGATGCTATTGTCGACTGCAACCTAAATAAAAATTACAACATACAAGAAGTTGAAATGATGATACAAGTTGCATTACTCTGCACCCAAGCTTCGCCCGAGGACCGTCCAGCAATGTCAGAGGTTGTTAGAATGCTAGAAGGAGAAGGGCTGGCTGAAAGGTGGGAGGAATGGCAACATGTGGAGGTTATACGGAGGCAAGAATATGACAGAATACAAAGAAGATTTGACTGGGGAGAAGATTCAGTTCATAACCAAGATGCCATTGAGTTGTCTGGTGGAAGATAA 1662 0.4122 MLRLINLLTGIKINSLALMGFTGFLTPRIGALKSLATLSLQGNGITGEIPKELGNLTSLIRLDLENNRLTGQIPSTLGNLKRLQFLTLSQNHLSGNIPESLGSLPSLINALLDSNNLSGRIPEQLFDVPKYNFSGNKLNCDMNYRHPCASDNADQGSSHKPKIGLIVGIIVGLIVVIFLGGLLFFWCKSRRKGYRREVFVDVAGEVDRRIAFGQLKRFAWRELQIATDNFSEKNVLGQGGFGKVYKGVLADNAKVAVKRLTDYESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRELKPGEPVLDWPTRKRVALGTARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDCNLNKNYNIQEVEMMIQVALLCTQASPEDRPAMSEVVRMLEGEGLAERWEEWQHVEVIRRQEYDRIQRRFDWGEDSVHNQDAIELSGGR 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2161 553 Gene3D Transferase(Phosphotransferase) domain 1 307 524 - -
Prci9g2161 553 FunFam Somatic embryogenesis receptor-like kinase 1 307 524 - -
Prci9g2161 553 ProSitePatterns Serine/Threonine protein kinases active-site signature. 353 365 IPR008271 GO:0004672|GO:0006468
Prci9g2161 553 Gene3D Ribonuclease Inhibitor 5 149 IPR032675 -
Prci9g2161 553 Pfam Protein kinase domain 231 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2161 553 SUPERFAMILY L domain-like 16 140 - -
Prci9g2161 553 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 16 515 - -
Prci9g2161 553 SUPERFAMILY Protein kinase-like (PK-like) 210 505 IPR011009 -
Prci9g2161 553 ProSitePatterns Protein kinases ATP-binding region signature. 236 258 IPR017441 GO:0005524
Prci9g2161 553 Pfam Leucine rich repeat 34 93 IPR001611 GO:0005515
Prci9g2161 553 CDD TM_EGFR-like 161 195 - -
Prci9g2161 553 FunFam Somatic embryogenesis receptor kinase 1 199 306 - -
Prci9g2161 553 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 26 148 - -
Prci9g2161 553 Gene3D Phosphorylase Kinase; domain 1 199 306 - -
Prci9g2161 553 ProSiteProfiles Protein kinase domain profile. 230 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2161 553 SMART serkin_6 230 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2161 Prci-Chr9 31796363 31804900 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2161 15 553 Receptor kinase-like Gene Family AT5G10290 80.891 0.0 860
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Prci9g2161 Pkinase 4.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2161 - - gmx:100793416 952.97