Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2138 ATGACTCAGCAGAATGTGATGGTTTCAGACGCAAATCCTGGACTCAACATGGCTATTACTGCCGCTGTTTCCAACTCCTCCATTTCCACGGCCTCGGCTCACAAACCCCCCGCCGTTCCCTCCGGTTATATTTCCATTCCCAGGAGAAAGGTTCTCAAGAACCTTGAAATCAATGCCTGCTGGGTTGACTCCATGAGAGCCTCTTCTCCCACCCATTCCAAATCCACTTCTCCTCTCGCCGAAGAACATCGCTCTTGGATTCTTTGCCACCCCTCCGCATTAGACATGTTCGAGCAAATCGTCGATGCCTCCAAGGGCAAGCAGATCGTCGTGTTCCTGGATTACGATGGTACTCTCTCGCCTATCGTCAACGACCCTGATCGTGCTTTCATGTCCGATGAGATGAGAAAAACAGTACGAAAAGTCGCGAGGTGTTTTCCCACTGCCATAGTGAGCGGCAGATGCAGAGACAAGGTATATAATTTCGTTCGCCTGGCCGAGCTATATTATGCGGGAAGCCATGGCATGGACATCAAAGGCCCGACGAGATGCTCCCAATACAATAAAGGAAGCAAAGCAGAGGCCATTCTTTTTCAGCCTGCCAGTGAGTTTCTTCCCATGATAGATGAGGTGTACCGAGCGTTAGTTGAAGAAACCAAATCAACACCTGGCGCGATGGTGGAGAACAACAAGTTCTGCGTCTCTGTTCACTATCGTTGTGTTGACGAGAAGAAATGGAGCGAACTGGCTCACCAAGTGAAATCGGTGCTTAAGGAGTACCCGAAGCTTCGTCTCACCCAAGGAAGGAAGGTATTTGAGATTCGTCCCTCTATTAAATGGGACAAAGGGAAAGCCCTGGAATTTCTGCTAGAGTCACTAGGATTTGCCAATTGTGCTGATGTCTTCCCCGTCTACATTGGTGATGATCGAACGGACGAAGATGCCTTTAAGAAATTGAGAGACAGGGGACAAGGTTTAGGCATTCTCGTGTCAAAATTTCCAAGGGACACTATCGCATCTTACTCTTTACAGGAGCCGGAGGAGGTGAAGGACTTTCTTGGACATTTAGTGGAGTGGAAACAAGCATCTCAGCGTGCATGCTCCAAAGTGTAA 1113 0.4879 MTQQNVMVSDANPGLNMAITAAVSNSSISTASAHKPPAVPSGYISIPRRKVLKNLEINACWVDSMRASSPTHSKSTSPLAEEHRSWILCHPSALDMFEQIVDASKGKQIVVFLDYDGTLSPIVNDPDRAFMSDEMRKTVRKVARCFPTAIVSGRCRDKVYNFVRLAELYYAGSHGMDIKGPTRCSQYNKGSKAEAILFQPASEFLPMIDEVYRALVEETKSTPGAMVENNKFCVSVHYRCVDEKKWSELAHQVKSVLKEYPKLRLTQGRKVFEIRPSIKWDKGKALEFLLESLGFANCADVFPVYIGDDRTDEDAFKKLRDRGQGLGILVSKFPRDTIASYSLQEPEEVKDFLGHLVEWKQASQRACSKV 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2138 370 NCBIfam HAD-IIB family hydrolase 111 322 IPR006379 -
Prci9g2138 370 SUPERFAMILY HAD-like 110 359 IPR036412 -
Prci9g2138 370 NCBIfam trehalose-phosphatase 107 357 IPR003337 GO:0003824|GO:0005992
Prci9g2138 370 Gene3D - 211 369 IPR023214 -
Prci9g2138 370 Gene3D - 109 210 IPR023214 -
Prci9g2138 370 FunFam Trehalose 6-phosphate phosphatase 109 196 - -
Prci9g2138 370 CDD HAD_TPP 110 349 - -
Prci9g2138 370 Pfam Trehalose-phosphatase 112 346 IPR003337 GO:0003824|GO:0005992
Prci9g2138 370 FunFam Trehalose 6-phosphate phosphatase 201 277 - -
Prci9g2138 370 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 30 366 IPR044651 GO:0004805|GO:0005992
Prci9g2138 370 FunFam Trehalose 6-phosphate phosphatase 207 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2138 Prci-Chr9 31640714 31643292 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2138 105 319 Trehalose Biosynthesis Gene Families AT1G70290 27.556 4.93e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2138 K01087 - gmx:100794430 591.652