Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2136 ATGGCGACAATTATTGGTATGTATACTAATAGCAGCAGCCTGGCATCAGATTTGTTAGATCCGTGTAGTGAAGATGTGATAAAATCGCTCGAACCTTTTGTGTCAATGGATTCATCTGCGTCTCCTCTCTCTTCCCTCTCTTTCCCATCTTCGCCTTCCCGCTCGATTGCTTCACCCACTTCTATGCCCAGCTATTTTCCCGACCTACTCACAACATCGAGCTCCCCCGTATTTTCTTCGGGGTTCTCGAGTAGCATAGGGCTTAACCAACTTACCCCATCTCAAATTCTTCAGATTCAGGCTCAATTCCAGGTCCGACACCAACAATCCGTCGGTCTCCTCAGCCCAAAACCCGTCCCCATGAAACGTGTCCGTAATGCTCCGAAACCCACGAAACTGTACCGAGGAGTGAGGCAGAGGCATTGGGGCAAATGGGTGGCTGAGATCAGACTCCCAAAGAATCGAACCCGTCTCTGGCTCGGCACTTTTGACACTGCCGAAGAGGCTGCTCTGGCTTATGACAGTGCTGCTTATAAGCTCAGGGGTGAGTTTGCTCGCCTTAATTTCCCTCATCTGCGACACCAAGGAGTTCACGTGTTTGGTGAATTTGGGAATTACAAACCTCTGCATTCCTCCGTCGAAGCCAAGCTTCGAGCTATTTGTGAAAGCTTGGCCCAGAAACAGGGAAGTGCAGGGGAGGCTTGTTCCGTCGCCGATTCAAAGGCTAAGGTGGTGCCGGATGACTCAGAATCGAAAAGTGATGTAGAGGATTGTAAGGTGGAGAACGCGGCTTCGTCGCCTTCGTCTGATGAATCCTGGACCGGTTCGTCTTCCCCTGAATCCGACATCACTTTCTTGGATTTCTCGGATTCCAATGATGAGACCATCGACTTTGGGCTGGAGAAGTTTCCTTCCGTGGAGATTGATTGGTCTGCTATTTGA 942 0.5011 MATIIGMYTNSSSLASDLLDPCSEDVIKSLEPFVSMDSSASPLSSLSFPSSPSRSIASPTSMPSYFPDLLTTSSSPVFSSGFSSSIGLNQLTPSQILQIQAQFQVRHQQSVGLLSPKPVPMKRVRNAPKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDSAAYKLRGEFARLNFPHLRHQGVHVFGEFGNYKPLHSSVEAKLRAICESLAQKQGSAGEACSVADSKAKVVPDDSESKSDVEDCKVENAASSPSSDESWTGSSSPESDITFLDFSDSNDETIDFGLEKFPSVEIDWSAI 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2136 313 SMART rav1_2 133 196 IPR001471 GO:0003700|GO:0006355
Prci9g2136 313 SUPERFAMILY DNA-binding domain 133 191 IPR016177 GO:0003677
Prci9g2136 313 MobiDBLite consensus disorder prediction 240 287 - -
Prci9g2136 313 MobiDBLite consensus disorder prediction 262 287 - -
Prci9g2136 313 Gene3D AP2/ERF domain 133 191 IPR036955 GO:0003700|GO:0006355
Prci9g2136 313 ProSiteProfiles AP2/ERF domain profile. 133 190 IPR001471 GO:0003700|GO:0006355
Prci9g2136 313 MobiDBLite consensus disorder prediction 243 259 - -
Prci9g2136 313 PRINTS Ethylene responsive element binding protein signature 156 172 IPR001471 GO:0003700|GO:0006355
Prci9g2136 313 PRINTS Ethylene responsive element binding protein signature 134 145 IPR001471 GO:0003700|GO:0006355
Prci9g2136 313 FunFam Ethylene-responsive transcription factor 2 132 191 - -
Prci9g2136 313 Pfam AP2 domain 134 183 IPR001471 GO:0003700|GO:0006355
Prci9g2136 313 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 17 313 - -
Prci9g2136 313 CDD AP2 132 192 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2136 Prci-Chr9 31620567 31622211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2136 20 313 AP2-EREBP Transcription Factor Family AT4G39780 50.338 3.25e-84 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Prci9g2136 AP2 3.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2136 K09286 - rcu:8261646 334.339