Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci9g2108 | ATGAATTCAACATCCACACAGTTTGTTTCCACCAGGAGGATGGGTGTATATGATCCTATCCACCAGATTAGCATGTGGGAAGAAAACTTCAAAAGCAATTGTAGTTTAAGTGCATCTATGTCTTTAATTGGTGAGGCAGATGTGAAGTTAGATACTCAGTCAGAGGACTCTTCTCATGGTATTCTCGGAATTCCAAGGAATTATGACCAAGAAGCTAATAAGTCTATTGAAAAGATACAAAGACGCCTTGCACAAAATCGAGAGGCTGCTCGTAAGAGTCGTCTACGGAAAAAGGCTTATGTTCAGCAATTAGAATCAAGTCGTTTGAAGCTGATCAAGTTAGAGCAAGAGCTGGACCGAGCAAGACAGCAGGAAACAAAACTGCAGGGATCTTTTATAGGTTGTAGATTGGATTCTGATAATCTGGTATTTGCTGGATCTGTAAATTCAGGTATTGCAACCTTTGAGATGGAGTATGGGCACTGGGTAGAAAAACAAAATAGACAAATCTGTGAACTGAGAACTGCTTTAAATGCTCATATCAGTGATGTAGAGCTCAGAATACTTGTAGATGGTATAATGAATCACTATTCTGACCTTTTCCGCATGAAATCAGCAGCCGCAAAAGTGGATGTTTTCTATGTTTTGTTTGGCATGTGGAAAACAACAGCTGAACGGTTTTTCTTGTGGATTGGAGGATTCCGCCCATCTGAGCTTCTGAAGGTTCTTGTCCCTTTGATTGAACCCTTGACAGAGCAGCAACGAATGGATGTTTATAACCTTGGACAATCATGCCAGCAAGCAGAAGATGCACTTTCACAAGGTAGGGACAGACTTCAGCAAATTCTTGCTGAAACTGTTGCAGCCGGACAACTGGTTGACGGAACTTACATTCCTCAGATGGCTACTGCAGTGGAGAAGTTGGAAGCTTTGGTGAGCTTTGTGAACCAGAGCAGTCATTTTATGACTTTACATTTAGGAAGAACGATCTCGGAACTAGGAAGGCAGCTATAG | 1014 | 0.4162 | MNSTSTQFVSTRRMGVYDPIHQISMWEENFKSNCSLSASMSLIGEADVKLDTQSEDSSHGILGIPRNYDQEANKSIEKIQRRLAQNREAARKSRLRKKAYVQQLESSRLKLIKLEQELDRARQQETKLQGSFIGCRLDSDNLVFAGSVNSGIATFEMEYGHWVEKQNRQICELRTALNAHISDVELRILVDGIMNHYSDLFRMKSAAAKVDVFYVLFGMWKTTAERFFLWIGGFRPSELLKVLVPLIEPLTEQQRMDVYNLGQSCQQAEDALSQGRDRLQQILAETVAAGQLVDGTYIPQMATAVEKLEALVSFVNQSSHFMTLHLGRTISELGRQL | 337 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci9g2108 | 337 | Gene3D | - | 76 | 132 | - | - | |
Prci9g2108 | 337 | ProSiteProfiles | DOG1 domain profile. | 152 | 337 | IPR025422 | GO:0006351|GO:0043565 | |
Prci9g2108 | 337 | Pfam | bZIP transcription factor | 78 | 113 | IPR004827 | GO:0003700|GO:0006355 | |
Prci9g2108 | 337 | Pfam | Seed dormancy control | 169 | 244 | IPR025422 | GO:0006351|GO:0043565 | |
Prci9g2108 | 337 | SMART | brlzneu | 74 | 143 | IPR004827 | GO:0003700|GO:0006355 | |
Prci9g2108 | 337 | Coils | Coil | 265 | 285 | - | - | |
Prci9g2108 | 337 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 81 | 96 | IPR004827 | GO:0003700|GO:0006355 | |
Prci9g2108 | 337 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 1 | 324 | - | - | |
Prci9g2108 | 337 | SUPERFAMILY | Leucine zipper domain | 78 | 120 | IPR046347 | GO:0003700|GO:0006355 | |
Prci9g2108 | 337 | Coils | Coil | 97 | 131 | - | - | |
Prci9g2108 | 337 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 76 | 118 | IPR004827 | GO:0003700|GO:0006355 | |
Prci9g2108 | 337 | FunFam | BZIP family transcription factor | 77 | 126 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci9g2108 | Prci-Chr9 | 31450771 | 31455800 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci9g2108 | 1 | 321 | Calmodulin-binding Proteins | AT5G10030 | 66.254 | 1.26e-156 | 441 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Prci9g2108 | DOG1 | 5.5e-31 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci9g2108 | K14431 | - | gmx:100793353 | 496.123 |