Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2105 ATGAATTCAACATCCACACAGTTTGTTTCCACCAGGAGGATGGGTGTATATGATCCTATCCACCAGATTAGCATGTGGGAAGAAAACTTCAAAAGCAATTGTAGTTTAAGTGCATCTATGTCTTTAATTGGTGAGGCAGATGTGAAGTTAGATACTCAGTCAGAGGACTCTTCTCATGGTATTCTCGGAATTCCAAGGAATTATGACCAAGAAGCTAATAAGTCTATTGAAAAGATACAAAGACGCCTTGCACAAAATCGAGAGGCTGCTCGTAAGAGTCGTCTACGGAAAAAGGCTTATGTTCAGCAATTAGAATCAAGTCGTTTGAAGCTGATCAAGTTAGAGCAAGAGCTGGACCGAGCAAGACAGCAGGAAACAAAACTGCAGGGATCTTTTATAGGTTGTAGATTGGATTCTGATAATCTGGTATTTGCTGGATCTGTAAATTCAGGTATTGCAACCTTTGAGATGGAGTATGGGCACTGGGTAGAAAAACAAAATAGACAAATCTGTGAACTGAGAACTGCTTTAAATGCTCATATCAGTGATGTAGAGCTCAGAATACTTGTAGATGGTATAATGAATCACTATTCTGACCTTTTCCGCATGAAATCAGCAGCCGCAAAAGTGGATGTTTTCTATGTTTTGTTTGGCATGTGGAAAACAACAGCTGAACGGTTTTTCTTGTGGATTGGAGGATTCCGCCCATCTGAGCTTCTGAAGGTTCTTGTCCCTTTGATTGAACCCTTGACAGAGCAGCAACGAATGGATGTTTATAACCTTGGACAATCATGCCAGCAAGCAGAAGATGCACTTTCACAAGGTAGGGACAGACTTCAGCAAATTCTTGCTGAAACTGTTGCAGCCGGACAACTGGTTGACGGAACTTACATTCCTCAGATGGCTACTGCAGTGGAGAAGTTGGAAGCTTTGGTGAGCTTTGTGAACCAGGCTGATCATCTTCGGCAGGAAACCTTGCAACAAATTCTTCGAATCCTTACAATTCGTCAGGCAGCTCGATGCTTGCTTGCTTTAGGGGAATACTTCCAACGCTTGCGAGCTTTGAGCTCTCTCTGGGCTAATCGTCCTTCCGAACCACCTGCTTAG 1107 0.4282 MNSTSTQFVSTRRMGVYDPIHQISMWEENFKSNCSLSASMSLIGEADVKLDTQSEDSSHGILGIPRNYDQEANKSIEKIQRRLAQNREAARKSRLRKKAYVQQLESSRLKLIKLEQELDRARQQETKLQGSFIGCRLDSDNLVFAGSVNSGIATFEMEYGHWVEKQNRQICELRTALNAHISDVELRILVDGIMNHYSDLFRMKSAAAKVDVFYVLFGMWKTTAERFFLWIGGFRPSELLKVLVPLIEPLTEQQRMDVYNLGQSCQQAEDALSQGRDRLQQILAETVAAGQLVDGTYIPQMATAVEKLEALVSFVNQADHLRQETLQQILRILTIRQAARCLLALGEYFQRLRALSSLWANRPSEPPA 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2105 368 PANTHER TRANSCRIPTION FACTOR TGA9 1 365 - -
Prci9g2105 368 FunFam BZIP family transcription factor 77 126 - -
Prci9g2105 368 Pfam Seed dormancy control 169 244 IPR025422 GO:0006351|GO:0043565
Prci9g2105 368 ProSiteProfiles DOG1 domain profile. 152 362 IPR025422 GO:0006351|GO:0043565
Prci9g2105 368 SMART brlzneu 74 143 IPR004827 GO:0003700|GO:0006355
Prci9g2105 368 Coils Coil 265 285 - -
Prci9g2105 368 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 81 96 IPR004827 GO:0003700|GO:0006355
Prci9g2105 368 SUPERFAMILY Leucine zipper domain 78 120 IPR046347 GO:0003700|GO:0006355
Prci9g2105 368 Coils Coil 97 131 - -
Prci9g2105 368 Gene3D - 76 132 - -
Prci9g2105 368 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 76 118 IPR004827 GO:0003700|GO:0006355
Prci9g2105 368 Pfam bZIP transcription factor 78 113 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2105 Prci-Chr9 31450256 31455686 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2105 1 366 Calmodulin-binding Proteins AT5G10030 68.750 0.0 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci9g2105 DOG1 6.4e-31 No_clan