Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2101 ATGAATTCAACATCCACACAGTTTGTTTCCACCAGGAGGATGGGTGTATATGATCCTATCCACCAGATTAGCATGTGGGAAGAAAACTTCAAAAGCAATTGTAGTTTAAGTGCATCTATGTCTTTAATTGGTGAGGCAGATGTGAAGTTAGATACTCAGATACAAAGACGCCTTGCACAAAATCGAGAGGCTGCTCGTAAGAGTCGTCTACGGAAAAAGGCTTATGTTCAGCAATTAGAATCAAGTCGTTTGAAGCTGATCAAGTTAGAGCAAGAGCTGGACCGAGCAAGACAGCAGGAAACAAAACTGCAGGGATCTTTTATAGGTTGTAGATTGGATTCTGATAATCTGGTATTTGCTGGATCTGTAAATTCAGGTATTGCAACCTTTGAGATGGAGTATGGGCACTGGGTAGAAAAACAAAATAGACAAATCTGTGAACTGAGAACTGCTTTAAATGCTCATATCAGTGATGTAGAGCTCAGAATACTTGTAGATGGTATAATGAATCACTATTCTGACCTTTTCCGCATGAAATCAGCAGCCGCAAAAGTGGATGTTTTCTATGTTTTGTTTGGCATGTGGAAAACAACAGCTGAACGGTTTTTCTTGTGGATTGGAGGATTCCGCCCATCTGAGCTTCTGAAGGTTCTTGTCCCTTTGATTGAACCCTTGACAGAGCAGCAACGAATGGATGTTTATAACCTTGGACAATCATGCCAGCAAGCAGAAGATGCACTTTCACAAGGTAGGGACAGACTTCAGCAAATTCTTGCTGAAACTGTTGCAGCCGGACAACTGGTTGACGGAACTTACATTCCTCAGATGGCTACTGCAGTGGAGAAGTTGGAAGCTTTGGTGAGCTTTGTGAACCAGGCTGATCATCTTCGGCAGGAAACCTTGCAACAAATTCTTCGAATCCTTACAATTCGTCAGGCAGCTCGATGCTTGCTTGCTTTAGGGGAATACTTCCAACGCTTGCGAGCTTTGAGCTCTCTCTGGGCTAATCGTCCTTCCGAACCACCTGCTTAG 1032 0.4322 MNSTSTQFVSTRRMGVYDPIHQISMWEENFKSNCSLSASMSLIGEADVKLDTQIQRRLAQNREAARKSRLRKKAYVQQLESSRLKLIKLEQELDRARQQETKLQGSFIGCRLDSDNLVFAGSVNSGIATFEMEYGHWVEKQNRQICELRTALNAHISDVELRILVDGIMNHYSDLFRMKSAAAKVDVFYVLFGMWKTTAERFFLWIGGFRPSELLKVLVPLIEPLTEQQRMDVYNLGQSCQQAEDALSQGRDRLQQILAETVAAGQLVDGTYIPQMATAVEKLEALVSFVNQADHLRQETLQQILRILTIRQAARCLLALGEYFQRLRALSSLWANRPSEPPA 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2101 343 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 56 71 IPR004827 GO:0003700|GO:0006355
Prci9g2101 343 FunFam BZIP family transcription factor 52 101 - -
Prci9g2101 343 Coils Coil 72 106 - -
Prci9g2101 343 PANTHER TRANSCRIPTION FACTOR TGA9 1 340 - -
Prci9g2101 343 Pfam Seed dormancy control 144 219 IPR025422 GO:0006351|GO:0043565
Prci9g2101 343 Coils Coil 240 260 - -
Prci9g2101 343 Gene3D - 53 107 - -
Prci9g2101 343 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 51 93 IPR004827 GO:0003700|GO:0006355
Prci9g2101 343 Pfam bZIP transcription factor 55 88 IPR004827 GO:0003700|GO:0006355
Prci9g2101 343 SUPERFAMILY Leucine zipper domain 55 95 IPR046347 GO:0003700|GO:0006355
Prci9g2101 343 ProSiteProfiles DOG1 domain profile. 127 337 IPR025422 GO:0006351|GO:0043565
Prci9g2101 343 SMART brlzneu 49 118 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2101 Prci-Chr9 31450256 31455792 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2101 1 341 Calmodulin-binding Proteins AT5G10030 64.946 1.15e-169 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci9g2101 DOG1 5.7e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2101 K14431 - gmx:100793353 530.406