Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2072 ATGGGTCCCTTTACGCTGCCCATTATTGCTGAAGCCTCTTCCATAGGATCACCAGATGCTTGTACCAAGAGGACATATAACTCATTGATGAGAAAATCTTTTGCATCAGTCAGCATGGGCGAGGAAAAGCCTTTTGATTTTTTACGCACCTTATTTGAGGGCTTAGTTGCCGGAGGTACAGCTGGAGTTGTTGTTGAAACAGCTTTATACCCTATTGACACTATAAAGACACGCTTGCAGGCTGCCCGTGGGGGAGAAAAGTTAGTGCTGGAAGGCCTTTATTCTGGATTGGCAGGAAATCTTGCTGGTGTCTTACCGGCGTCTGCTCTGTTTGTTGGAGTCTATGAACCCGTAAAGCAGACACTGTCAAGGATATTGCCAGAAAATCTTAGTGCTTTTGCTCATTTTACTGCAGGTGCCATAGGGGGCATTGCTGCTTCACTGATTCGTGTTCCAACTGAGGTTGTTAAGCAACGAATCCAAACTGGGCAATTCACTTCACCTGCTATTGCTGTCCGCTATATTGCTTCTGTTGAGGGCATTAAAGGACTTTATGCAGGATATGGGTCTTTTCTGCTGCGTGATTTGCCCTTTGATGCCATTCAGTTTTGCATCTATGAGCAGCTTCGAATAGGTTATATGTTGGTGGCGCGAAGAAATCTGAACGATCCGGAAAATGCCATTGTTGGTGCTTTTGCTGGTGCACTGACTGGCGCTATAACTACTCCTCTTGATGTCATTAAGACGAGGTTAATGATTCAGGGAACTCCAAACCGATACAAAGGAATCATGGATTGTGTTCAAACTGTCATCAAGGAAGAGGGACCTCAGGCATTTTTGAAGCTGTTTCCTTGGGGAAGTGGGTCTTGTTGCAGTGAAAAATTCGAGAAAGTGGGGCGCTTCATATTTCTGTGCTTGACAAGTAATTGTTTATTGTGTGATATGGTGATTGGTGGAGTCCTTTTCCTCATCATGAGGTGGTTGGTGGAGCTATGCGTGACATCCTAG 1008 0.4504 MGPFTLPIIAEASSIGSPDACTKRTYNSLMRKSFASVSMGEEKPFDFLRTLFEGLVAGGTAGVVVETALYPIDTIKTRLQAARGGEKLVLEGLYSGLAGNLAGVLPASALFVGVYEPVKQTLSRILPENLSAFAHFTAGAIGGIAASLIRVPTEVVKQRIQTGQFTSPAIAVRYIASVEGIKGLYAGYGSFLLRDLPFDAIQFCIYEQLRIGYMLVARRNLNDPENAIVGAFAGALTGAITTPLDVIKTRLMIQGTPNRYKGIMDCVQTVIKEEGPQAFLKLFPWGSGSCCSEKFEKVGRFIFLCLTSNCLLCDMVIGGVLFLIMRWLVELCVTS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2072 335 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 31 281 - -
Prci9g2072 335 FunFam S-adenosylmethionine carrier 1 chloroplastic/mitochondrial 53 288 - -
Prci9g2072 335 SUPERFAMILY Mitochondrial carrier 52 280 IPR023395 -
Prci9g2072 335 Pfam Mitochondrial carrier protein 51 85 IPR018108 -
Prci9g2072 335 Pfam Mitochondrial carrier protein 225 280 IPR018108 -
Prci9g2072 335 Pfam Mitochondrial carrier protein 130 210 IPR018108 -
Prci9g2072 335 Gene3D Mitochondrial carrier domain 51 292 IPR023395 -
Prci9g2072 335 PRINTS Mitochondrial carrier protein signature 67 81 IPR002067 GO:0055085
Prci9g2072 335 PRINTS Mitochondrial carrier protein signature 230 252 IPR002067 GO:0055085
Prci9g2072 335 PRINTS Mitochondrial carrier protein signature 185 203 IPR002067 GO:0055085
Prci9g2072 335 PRINTS Mitochondrial carrier protein signature 54 67 IPR002067 GO:0055085
Prci9g2072 335 ProSiteProfiles Solute carrier (Solcar) repeat profile. 221 307 IPR018108 -
Prci9g2072 335 ProSiteProfiles Solute carrier (Solcar) repeat profile. 130 212 IPR018108 -
Prci9g2072 335 ProSiteProfiles Solute carrier (Solcar) repeat profile. 49 121 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2072 Prci-Chr9 31321086 31326777 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2072 51 302 Chloroplast and Mitochondria Gene Families AT1G07030 31.095 1.90e-29 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2072 K15111 - gmx:100811130 446.432