Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2057 ATGTCAAAGGTGGAGAATCTTAGAGACAAGGCCAAGGACGAAGATGAACACACAAGCAATTTCGTCACGTCTGTGCCGATGGTATTTCCAGATATCGATAGGGAGAGGGAGATGTCTGCTATGGTTTCAGCCCTGACCCACGTGGTGTCCGGAGAGGTGCCTTCTGATTATACGGTTTTTCATCAGTACTTAACGTACCCAGATACAGTCGAAGCTTCTGTGACCACATCTTCGTCGTCTTCATTTTACGGTGCTAGTTCTGCTGTAACGACGAGCATGGAAGATGGTACATTCTCGTGGGGTGGTTCATCCTCATCCCCTGCTGTTCCCACAAATGGAGAAGGCAGGACCGGGAGGAGCGAGATGAGGGGAATGAGAAATGCAGTGTATGAATACAGGACAGAGAATGGAAGGGAGCAGGAGAGAAGAAAATACAGAGGAGTGAGGCAGAGGCCATGGGGGAAGTGGGCTGCAGAAATCAGAGATCCATTCAAAGCAGCGAGGGTGTGGTTAGGAACATTCGACACAGCAGAAGCAGCAGCCAGAGCATACGACGAAGCTGCCCTGCGTTTCAGAGGCAACAAGGCTAAGCTCAATTTCCCTGAAAATGTCACCCTTCGTCCCCCTCCCCCAGATCTTCACAACCTGCAGGCTTCTCACATGGTCTCTCATCTTCAACCATCACCCTTGCCACCGGCTGCGTCCTCCTCCTCCTCCTTTCACGCCTTTGCTTCCCCTGTTGCTACACTTCCTTCGCCTTATCCTGCACAGACTCCCATGACTGATTCTGCGCACGTCGTAGCTTCATCGTTCTCTTCTGCCAGTCACACCTCCTTTTTTCCTTGA 846 0.513 MSKVENLRDKAKDEDEHTSNFVTSVPMVFPDIDREREMSAMVSALTHVVSGEVPSDYTVFHQYLTYPDTVEASVTTSSSSSFYGASSAVTTSMEDGTFSWGGSSSSPAVPTNGEGRTGRSEMRGMRNAVYEYRTENGREQERRKYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPENVTLRPPPPDLHNLQASHMVSHLQPSPLPPAASSSSSFHAFASPVATLPSPYPAQTPMTDSAHVVASSFSSASHTSFFP 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2057 281 MobiDBLite consensus disorder prediction 99 120 - -
Prci9g2057 281 CDD AP2 144 203 IPR001471 GO:0003700|GO:0006355
Prci9g2057 281 SMART rav1_2 144 207 IPR001471 GO:0003700|GO:0006355
Prci9g2057 281 MobiDBLite consensus disorder prediction 99 113 - -
Prci9g2057 281 Pfam AP2 domain 144 193 IPR001471 GO:0003700|GO:0006355
Prci9g2057 281 SUPERFAMILY DNA-binding domain 144 202 IPR016177 GO:0003677
Prci9g2057 281 PRINTS Ethylene responsive element binding protein signature 145 156 IPR001471 GO:0003700|GO:0006355
Prci9g2057 281 PRINTS Ethylene responsive element binding protein signature 167 183 IPR001471 GO:0003700|GO:0006355
Prci9g2057 281 PANTHER DNA-BINDING DOMAIN 107 234 IPR044808 GO:0003700|GO:0009873
Prci9g2057 281 Gene3D AP2/ERF domain 143 203 IPR036955 GO:0003700|GO:0006355
Prci9g2057 281 FunFam Ethylene-responsive transcription factor 2 143 202 - -
Prci9g2057 281 ProSiteProfiles AP2/ERF domain profile. 144 201 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2057 Prci-Chr9 31264060 31265817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2057 11 209 AP2-EREBP Transcription Factor Family AT5G64750 47.685 2.27e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci9g2057 AP2 3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2057 - - pcin:129319888 489.189