Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2050 ATGGCGAAATCACTTGAATGTGAGTATCCGCAGAAGGTTGGTTGGGCTGCCAGGGATAATTCTGGCCATCTTTCTCCCTTTACCTTCTCGAGAAGGGAAGTTGGGGACGATGATGTTGCTTTGAAAATTTTGTTTTGTGGGGTTTGCCATTCGGATCTGCATACTGTTAAGAACGAGTGGGGTTTCACAACGTACCCCGTTGTTCCTGGACATGAAATTACTGGCGTTGTGACACAAGCTGGGAATAATGTGAAAAAATTCGAAGTGGGTGACAAAGTCGGAGTTGGTGTCATTGTGGACTCCTGCAAGGCATGTGATGCTTGCCAGCAGAACCTGGAGAACTACTGTCCTCGACCAGTATTTACCTACAACTCTCTCGGCTTTGATGGGATAAGAACCTATGGTGGCTATTCTGATTTTGTGGTTGTTCACGAGCGATTTGTAGTGAAATTTCCTGAGAACTTACCCCTTGACAGTGGTGCTCCACTTCTCTGTGCTGGGATTACTGCGTACAGTCCAATGAAATATTATGGAATGACAGAGCCAGGTAAACATTTGGGAGTGGCAGGGCTTGGTGGGTTAGGTCATGTTGCAGTGAAAATTGGCAAGGCCTTTGGGCTGAAAGTTACTGTCATTAGCACCTCCCAGAAAAAGGAAGTCGAGGCTATCAACAACCTTGGGGCTGATTCCTTCCTTGTTTCGACCGACCCTGAGAAAATGAAGGCAGCTATGAACAGCATGGACTTCATCATAGACACAATTTCCGCAGTCCATTCCCTCGTTCCTCTGCTTGGTCTGCTGAAGTTAAATGGGAAGCTGATCACCGTTGGGTTGCCTGTGAAGCCCTTAGAGCTTCCGATCTTCCCTCTAGTTGCAGGACGGAAGCTCGTGGGGGGAAGTGACTTTGGAGGAATAAAAGAGACGCAGGAGATGCTTGACTTTTGTGGAAAGCACAACATCAGTGCAGATATTGAGCTGATTAGGATGGACCAAATCAACACTGCCATGGAAAGGCTGGCCAAGTCTGACGTGAAGTACCGCTTTGTGATTGACGTGGCAAACTCCTTAAGAGGGGTGGTGGAGTAG 1086 0.4761 MAKSLECEYPQKAXGWAARDNSGHLSPFTFSRREVGDDDVALKILFCGVCHSDLHTVKNEWGFTTYPVVPGHEITGVVTQAGNNVKKFEVGDKVGVGVIVDSCKACDACQQNLENYCPRPVFTYNSLGFDGIRTYGGYSDFVVVHERFVVKFPENLPLDSGAPLLCAGITAYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSQKKEVEAINNLGADSFLVSTDPEKMKAAMNSMDFIIDTISAVHSLVPLLGLLKLNGKLITVGLPVKPLELPIFPLVAGRKLVGGSDFGGIKETQEMLDFCGKHNISADIELIRMDQINTAMERLAKSDVKYRFVIDVANSLRGVVE 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2050 362 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Prci9g2050 362 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Prci9g2050 362 SUPERFAMILY GroES-like 19 185 IPR011032 -
Prci9g2050 362 FunFam Cinnamyl alcohol dehydrogenase 167 323 - -
Prci9g2050 362 Gene3D - 16 353 - -
Prci9g2050 362 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 321 IPR036291 -
Prci9g2050 362 Gene3D - 167 323 - -
Prci9g2050 362 PANTHER ALDEHYDE REDUCTASE 7 356 IPR047109 GO:0016616
Prci9g2050 362 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
Prci9g2050 362 FunFam probable cinnamyl alcohol dehydrogenase 16 172 - -
Prci9g2050 362 Pfam Zinc-binding dehydrogenase 194 315 IPR013149 -
Prci9g2050 362 CDD CAD1 15 352 IPR047109 GO:0016616
Prci9g2050 362 FunFam Putative cinnamyl alcohol dehydrogenase 6 324 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2050 Prci-Chr9 31180333 31184858 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2050 11 357 Monolignol Biosynthesis Gene Families AT2G21730 70.487 4.17e-179 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2050 K00083 - gmx:100819684 568.155