Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2036 ATGCTGGAAAACTCTTCATCGGCTAATACTGCGGATCCCGTTCAGAACCGCCCAGTTGAGGACGGAGACGGGAGCGGGCCTGACTCCAATGGCCTCCAAGACCAAAGAGGGCTCGCAGGCCCGGCAGCTGACCTGAATTCCGCCGGTCAGCGGTGGCCTCGGGAAGAGACGCTGGCTTTGCTCAAAATAAGGTCTGAGATGGACATTGCTTTCAGGGACATAAGCCCCAAAGGTCCTCTCTGGCAACAGGTTTCGAGGAGGTTGGAAGAGCTAGGATACCACAGGAGTGCAAAGAAATGTAAGGAGAAGTTCGAGAACGTTTACAAGTACCACAGAAGGACCAAGGAAGGCCGTTATGGCCAACCCAGCCGCAAGACTTATCGTTTCTTTGAGCAGCTAGAAGCTCTTGATGCCCACCTGCTCCTTCCACCTCCAAGTTCAACAGAAAAGGATCACATGCCACATACGACGACCCCACTGGATGTTGTTCACCATGCCGTGCCCTGCTCTACTCGATTCCCTGGTGCAAATAGCAATTCCATCACTTCCTCTTCCAATGAAGAATGTGGGGAAGCTACGCCCAGAAAGAAGAGTAGGCTGACCAAGTTTTTCCGGGGCTTGATGAAGGAAGTAATAGAGAAGCAGGAGACTCTACAGATGAAATTGATGAAGGTGTTGGAAAAATGTGAGCAGGATCGAATAGCGAGGGAGGAAGCGTGGAGGACGCAAGAATTAGCTCGGCTTAACAGAGAGCACGAGCTTTTGGCTCAAGAAAGATCTGTAGCGGCAGCCAAGGATGCCGCCTTGCTTGCGTTTCTCAAGAAGATAACAGAACAATCAGCATGCCCGGTGCAACTGCCGGAGGATATTCCGTTTGATCGGATCCTGATTCCAGACGATGTGGACAACGACAAACAAGAAATTGTCAATGGAGGTTGTACTGTTAGCTTCACGGATAAGCAAGAATTGGCGAGTGTTGGGAATTTCATACAGATGAGCTCCTCCCGCTGGCCCAAAGAAGAAGTGGAAGCTCTGATTAGATTGAGGACAAACCTGGATGTGGAATATGAAGGAAATAATGGGCCTAAGGGACCCCTGTGGGAAGAAATATCCGTGGAAATGAAAAGGCTCGGGTACGATCGCAGTGCCAAGAGATGCAAAGAGAAATGGGAGAACATAAACAAATACTTTAAGAGGATGAAGCAGAAAAATAAGAGAAAGCCTGAGGATTCAAAGACGTGCCCATATTTTCACCAGCTAGATGCTCTATATAGTAAGAAACCTAGGAAGGCCCAAGGATCAGCTGCTTCTGGGAACGAGTCGAGGCCGGAGGAGCTATTGATGCATATTATGAGCAGTCAAGAAGAGCGACAATCATCTGAAGATGCCGACAGCAAGAAGACGAATCAGATTGAAGGAGATAAGGAACGTGTGGATCAGATGGTAGACAATAGTACTTCAACCGCAATCATGGGTTGA 1479 0.4895 MLENSSSANTADPVQNRPVEDGDGSGPDSNGLQDQRGLAGPAADLNSAGQRWPREETLALLKIRSEMDIAFRDISPKGPLWQQVSRRLEELGYHRSAKKCKEKFENVYKYHRRTKEGRYGQPSRKTYRFFEQLEALDAHLLLPPPSSTEKDHMPHTTTPLDVVHHAVPCSTRFPGANSNSITSSSNEECGEATPRKKSRLTKFFRGLMKEVIEKQETLQMKLMKVLEKCEQDRIAREEAWRTQELARLNREHELLAQERSVAAAKDAALLAFLKKITEQSACPVQLPEDIPFDRILIPDDVDNDKQEIVNGGCTVSFTDKQELASVGNFIQMSSSRWPKEEVEALIRLRTNLDVEYEGNNGPKGPLWEEISVEMKRLGYDRSAKRCKEKWENINKYFKRMKQKNKRKPEDSKTCPYFHQLDALYSKKPRKAQGSAASGNESRPEELLMHIMSSQEERQSSEDADSKKTNQIEGDKERVDQMVDNSTSTAIMG 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2036 492 MobiDBLite consensus disorder prediction 449 481 - -
Prci9g2036 492 ProSiteProfiles Myb-like domain profile. 51 108 IPR001005 -
Prci9g2036 492 CDD GT1 335 401 - -
Prci9g2036 492 CDD GT1 51 115 - -
Prci9g2036 492 MobiDBLite consensus disorder prediction 425 492 - -
Prci9g2036 492 FunFam Trihelix transcription factor GT-2 52 113 - -
Prci9g2036 492 FunFam Trihelix transcription factor GT-2 337 399 - -
Prci9g2036 492 SUPERFAMILY Homeodomain-like 334 396 IPR009057 -
Prci9g2036 492 Gene3D - 52 113 - -
Prci9g2036 492 Gene3D - 337 399 - -
Prci9g2036 492 Pfam Myb/SANT-like DNA-binding domain 50 136 IPR044822 -
Prci9g2036 492 Pfam Myb/SANT-like DNA-binding domain 335 423 IPR044822 -
Prci9g2036 492 ProSiteProfiles Myb-like domain profile. 335 394 IPR001005 -
Prci9g2036 492 SMART sant 48 110 IPR001005 -
Prci9g2036 492 SMART sant 333 396 IPR001005 -
Prci9g2036 492 PANTHER FI21293P1 19 479 - -
Prci9g2036 492 MobiDBLite consensus disorder prediction 1 50 - -
Prci9g2036 492 Coils Coil 245 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2036 Prci-Chr9 31123384 31125748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2036 332 426 Trihelix Transcription Factor Family AT1G76880 44.211 1.29e-17 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Prci9g2036 Myb_DNA-bind_4 2.5e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2036 - - qsa:O6P43_030370 538.11