Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2031 ATGCTGAGAGATGATCTATGCATCACAATTCCCAGCTTCTTCCGGTGCCCTATCTCTCTCGACGTCATGAAATCCCCAGTCAGCCTCTGCACCGGAGTAACCTACGATCGTTCCAGTATCCAACGCTGGCTCGACGACGGCAACACCACCTGCCCCGCCACCATGCAGGTCCTCCAATCCAAGGAATTTGTCCCCAACCTTACTCTGCAAAGGCTTATCCAGATCTGGACTGACTCCGTTCGAACCCGGGTCGAATCCGCCGGCTCCCCTGCTGCCAAATCGGTCCCGTCCCGGGACCAAGTCCTTGACGCTGTCACAGATTTGAAGGCCAAGAGCGGGAACCCTTTGTGCTCCCTTGCTGGAATTCTATCCTTTGCTGAAGAATCCGAAAACAATCGGGAGTTCCTGGCCAAAATAGAGGGGTTGGTGCCTTTGCTCGTTGGTTTCCTCGACAATGTTGATGGTGGAATCCCTCGGAGCGTTGAATTTCTTGAAAAAGTTGTCAAGGCTCTGGACTTCGTCCTCAGTAAAGCCCAAGATGACGAGACAGTGAAACATTCGATTGTGAAGAACCAGCAAGGCAATTGTATAGCTTCTCTACTTCTTGTTCTGCAACGAGGCAGCTCTGATTCGAGAATCGCATCGGCTAAGGTTTTGAAATTCGCCGCTGCGGATGTTGAATCAAAAATCTTGATCGCTGAAAAGGAAGGCCTGATTCGTGGATTGTTTAAAATGATATCATCAGACGGAGATGCGATGCTAATCGAGAACGGCTTGTCCTGCTTGGTGGCAATCTCAACGCCGAAACGAAACAAGGCGAGATTGATCCATCTCGGAGTTGTGAAGACATTATCGGAATTGCTTTCGGAGTCGAAGTGGAGCGTTGCCATCACCGAGAATGTACTGACGCTGCTCGAAACGGTGTCGTCGACCAGGGAAGGAAGATCGCAGATTTGTGAGGACCCGACTTGCGTGGCGTCGATACTGCAGAAGGTCCTGAAAGTGTCGAATGCGGCGACGGAGCACGCAGTGACTATACTCTGGAGCGTGTGTTATGTATTTCGTGATCAGAAGGCGCAGGAAGCGGTGACGAAGGCTCACGGTTTGACCAAGATTCTGCTTCTGATGCAGAGCAATTGTTCGCCAGGAGTTCGTCAAATGTGCGCCGATTTGCTCAAGATTTTCCGGGTTAACTCCAAATCATGTCTCTCCTGCTACCACACCAAGACCACCCATATCATGCCCTTTTGA 1251 0.5092 MLRDDLCITIPSFFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDDGNTTCPATMQVLQSKEFVPNLTLQRLIQIWTDSVRTRVESAGSPAAKSVPSRDQVLDAVTDLKAKSGNPLCSLAGILSFAEESENNREFLAKIEGLVPLLVGFLDNVDGGIPRSVEFLEKVVKALDFVLSKAQDDETVKHSIVKNQQGNCIASLLLVLQRGSSDSRIASAKVLKFAAADVESKILIAEKEGLIRGLFKMISSDGDAMLIENGLSCLVAISTPKRNKARLIHLGVVKTLSELLSESKWSVAITENVLTLLETVSSTREGRSQICEDPTCVASILQKVLKVSNAATEHAVTILWSVCYVFRDQKAQEAVTKAHGLTKILLLMQSNCSPGVRQMCADLLKIFRVNSKSCLSCYHTKTTHIMPF 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2031 416 Gene3D - 116 399 IPR011989 -
Prci9g2031 416 SUPERFAMILY ARM repeat 169 402 IPR016024 -
Prci9g2031 416 ProSiteProfiles U-box domain profile. 9 83 IPR003613 GO:0004842|GO:0016567
Prci9g2031 416 FunFam RING-type E3 ubiquitin transferase 2 82 - -
Prci9g2031 416 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 9 82 IPR013083 -
Prci9g2031 416 SUPERFAMILY RING/U-box 6 78 - -
Prci9g2031 416 CDD RING-Ubox_PUB 11 63 IPR045210 -
Prci9g2031 416 PANTHER WDSAM1 PROTEIN 9 404 IPR045185 GO:0061630
Prci9g2031 416 Pfam U-box domain 10 78 IPR003613 GO:0004842|GO:0016567
Prci9g2031 416 SMART Ubox_2 13 76 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2031 Prci-Chr9 31066602 31068210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2031 1 416 U-box Gene Family AT5G64660 52.706 3.39e-143 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2031 - - qsa:O6P43_023349 564.303