Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2019 ATGGCCTGCTCTGCTTTTTTTACCATCTTCCTTCTCGTCTCCGTCTCCTCCTCCGCCGCCGCTTCCTCCTCTATCCAACGCGCCTGCTATGCCACCCGCTTCCCTCCAGACTGCCTCTATTCACTCATCACCCGACCCTTTAATGACCTCCCTCCCGATCCCTCGCCCCTTCAAATCATCCAATCCGCGATCGCCTTCTCCGCCGACAACGTCAAGACCGCCCAATCCAAGATCAAGTCCATCCTCGACTCCTCGTCCGACAATGGCGACTATCTCAATCGCACCATGGCCGCCAAGAGCTGCTTCGCCATCCTACTTAACTCCGAGTATCGCATTTCCCTCATCAAGAACGCCCTCCAGAGCGGCAGGACCAAGGACGCGCGTGCCTGGATGAGTGCTGCATTGGCCTACCAGTTTGACTGCTGGTCTGGGTTGAAGTACGTATACGGCAATGACGCCGCCTCCATCGACGACACTCTGTTCTTCCTGGACTCCCTCACGAGGTATTCTAGCAACGCGCTGAGCATGATGGTGTCGTACGACGTGTTTGGGAGCGACACGGCGTTGTGGAAGGAGCCGAGGACAGAGCGCGACGGCTTCTGGGAGGCACCGTCGGGAAAAGAGAGGGGGTTTGGGTACAGTGGCGGGTTTCCGTTGAATTTGAAGGTGGACGTTACGGTTTGTGAGAAAAAAGAGAAGGGGTGTTACAAGACGGTGCAGGAAGCCGTCAACGCGGCTCCGGATAACAGTGAAGCGAGATTTGTGATTCACATAAGAAAAGGGGTTTATGAGGAAACTGTTAGGATTCCGATTGAGAAGAAGAATGTCATATTTTTGGGTGACGGCATGAGGAAGACTATTATCACTGGATCTGCACATGTAGGTCAGCCTGGAATGACCACCTACAATTCCGCTACCGTTGGGGTTCTGGGGGATGGGTTCATGGCGAAGAATCTAACAATCCAAAACACGGCAGGACCCGATGCTCACCAAGCAGTAGCCTTCAGATCAGACAGCGACCTCTCAGTCCTGGACAACGTCGAATTCATAGGCAATCAAGATACCCTATATGCGCATTCCCTTCGCCAATTCTACAAATCGTGTCGCATCCAAGGCAACGTGGACATGATCTTCGGTAACGCGGCTTCGATTTTCCAGGAGTGCGCGATCCTGTTGAGTCCAAGGGGGAGCAACTCAAAAACAGGGGAGACCAATGTGGTCACGGCGCACGGGAGATCAGACCCAGCGCAATCGACAGGCTTTGTATTTCATAAATGCGTGGTGACCGGGACCAAGGAGTACATGGCACAGTACCGTAAGAAGCCAGAGGTGCACAAGAACTTCTTGGGGAGGCCATGGAAGGTGTACTCGAGAACGGTGTTCATTCATTCTGTGTTGGAAGCACTCATCTCGGCCGAGGGTTGGATGGCCTGGGACGGTGATCTGGGTCTGGACACACTTTACTATGGGGAGAGTAACAATGCAGGTCCTGGTTCTGACAGGAGTCGGAGAGTGGCCTGGAGCAGCGAAATCCCCCACCAACACGTGTCGTCATTTTCTGTTGACAACTTCATTCAAGGAAGTGATTGGATTCCATCCTATCAGCTAAGTCATCGTTAG 1620 0.5333 MACSAFFTIFLLVSVSSSAAASSSIQRACYATRFPPDCLYSLITRPFNDLPPDPSPLQIIQSAIAFSADNVKTAQSKIKSILDSSSDNGDYLNRTMAAKSCFAILLNSEYRISLIKNALQSGRTKDARAWMSAALAYQFDCWSGLKYVYGNDAASIDDTLFFLDSLTRYSSNALSMMVSYDVFGSDTALWKEPRTERDGFWEAPSGKERGFGYSGGFPLNLKVDVTVCEKKEKGCYKTVQEAVNAAPDNSEARFVIHIRKGVYEETVRIPIEKKNVIFLGDGMRKTIITGSAHVGQPGMTTYNSATVGVLGDGFMAKNLTIQNTAGPDAHQAVAFRSDSDLSVLDNVEFIGNQDTLYAHSLRQFYKSCRIQGNVDMIFGNAASIFQECAILLSPRGSNSKTGETNVVTAHGRSDPAQSTGFVFHKCVVTGTKEYMAQYRKKPEVHKNFLGRPWKVYSRTVFIHSVLEALISAEGWMAWDGDLGLDTLYYGESNNAGPGSDRSRRVAWSSEIPHQHVSSFSVDNFIQGSDWIPSYQLSHR 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2019 539 Gene3D Invertase/pectin methylesterase inhibitor family protein 19 179 IPR035513 -
Prci9g2019 539 NCBIfam pectinesterase inhibitor domain 5 147 IPR006501 GO:0004857
Prci9g2019 539 Pfam Pectinesterase 225 527 IPR000070 GO:0030599|GO:0042545
Prci9g2019 539 Gene3D - 222 539 IPR012334 -
Prci9g2019 539 SUPERFAMILY Pectin lyase-like 225 534 IPR011050 -
Prci9g2019 539 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 23 176 IPR035513 -
Prci9g2019 539 CDD PMEI-like_3 28 177 - -
Prci9g2019 539 SMART PMEI_2 20 176 IPR006501 GO:0004857
Prci9g2019 539 Pfam Plant invertase/pectin methylesterase inhibitor 24 176 IPR006501 GO:0004857
Prci9g2019 539 FunFam Pectinesterase 4 221 539 - -
Prci9g2019 539 PANTHER PECTINESTERASE 11 532 - -
Prci9g2019 539 FunFam Probable pectinesterase/pectinesterase inhibitor 51 23 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2019 Prci-Chr9 31022313 31025586 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2019 15 530 Carbohydrate Esterase AT5G09760 61.731 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2019 - - csv:101221165 690.263