Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2004 ATGCCCGCCTGGTGGGGAAGAAAGTCCAGCAAGAACAAGGAGGAGCAGCGGCAACAGCAGCTTCCCCAGCCTGAATCACATGGTGGCCTTCAGTTTAATTTCATCAAATCTCCGATCAGGAATGGTGCCAAGAAAGAGGACAAACCCAAGAGCTTTGATGAGGTCTCGACCGTGATGCTTTCTCGGAGTTCACCCAGAACCAGCAGGGATTTTACTCCCATCGGTGCTGCTCCTGGTGGTGGTTCCTCCTCGGGGTTTTCGGGTTTCGATTCCGATGGCGGCGAGAAGATAGGCCTTCCCTTGCCTCGACCATCGATTTCGTCCCCGCAGAGCTTGGGGAATGATCAAGGAGATGGAGATGGCTTGGGATCTGCGTCGATCTCTGGTTCAAGCGTGAGTTCTTCTGGGTCCTGCGACCATCATCCGATCTCTCAATTGGAAAGCGTCAGGGGACGAGGTGATATGAAGATTAATATGAGGTCAAAAAGCCCAGGTCCTGGGTCTAGAGGACCCACCAGCCCGACTTCACCACTTCATCCAAGATTGCATGCTCTAAGTATAGACTCTCCTACAGGCAAACAAGATGATGGAAGGAGTGAATGTCATCCATTGCCCCTACCACCAGGTTCACCGACTAGCCCTTCTGCTCTTTCCAATGCAAGAGCAAATAGTCTTCTGGAAAACACTACCAATAATCTGTCCAAGTGGAAGAAAGGAAAGCTTTTAGGACGAGGCACATTTGGTCATGTTTACATGGGATTTAATAGTGAAAGTGGACAAATGTGTGCAATAAAAGAAGTCAGAGTTTTCTCTGATGATCAAACATCAAAAGAATGCCTCAAACAGCTTAACCAGGAGATAAATCTGCTTAGTTCGCTTTCCCATCCTAATATTGTTGAATACTACGGGAGTGAACTGGGAGAAGACACACTTTCTGTTTATTTAGAATATGTCTCTGGTGGTTCCATCCATAAACTACTTCAGGAATATGGTCCATTTAAGGAGCCTGTTATTCAGAATTATGTCAGGCAGATTGTCTCTGGACTTGCCTATCTGCATGGAAGAAACACGGTGCACCGGGATATCAAAGGGGCAAACATACTAGTTGATCCTAATGGCGAAATTAAGTTGGCGGATTTTGGAATGGCTAAACATATAAATTCTTCTACCTCCATGCTTTCTTTCAAGGGAAGTCCATATTGGATGGCACCTGAGGTTGTTATGAATACAAATGGCTACAATCTTGCTGTGGATGTATGGAGCTTGGGATGCACAATTCTGGAAATGGCGACATCAAAGCCTCCATGGAGTCAGTATGAAGGGGTAGCTGCTATATTTAAAATTGGGAACAGCAAAGATATGCCTGAAATTCCAGAGCATCTTTCGAATGATGCTAAGTCCTTCATACAGCTATGCTTACAAAGAGATCCATCAGCTCGCCCAGCTGCTCAAAGGTTGCTAGAGCATCCCTTTATTCGTGATCAATCTGCAACAAGAGCTGCAAATGTCAGCTTAACCAGGGATGCTTTCCCCTACATGTTTGATGGAAGCCGGACACCGCCACATGTAGAGCTTCATTCCAGTAGAACGAATATGACTTCAGTGGATGGAGATTATGCAACAAAGCCAACTTTTGCGGCTTCTCGAGGATTAAGGAGCCCAAGAGATAACACAAGAATGATTACATCTTTACCGGTATCTCCCTGCTCAAGTCCGTTGCGACAACATGGATCAGCATACAAGAGCTGTATGCTTTCTCCTCCACATCCAACTTACAGCACGATGGGACAAAATACCTACAATTTTAGCGATATCTGTTCACATCCAGTGAGATCAAACGCTACCTTTAATCTAGACCCTTGGAATGAGAGATCCCTATATAACGCCCATACGCCTGGTGGGTCCCCAAGACGGAGACTCATTTGA 1926 0.46 MPAWWGRKSSKNKEEQRQQQLPQPESHGGLQFNFIKSPIRNGAKKGXDKPKSFDEVSTVMLSRSSPRTSRDFTPIGAAPGGGSSSGFSGFDSDGGEKIGLPLPRPSISSPQSLGNDQGDGDGLGSASISGSSVSSSGSCDHHPISQLESVRGRGDMKINMRSKSPGPGSRGPTSPTSPLHPRLHALSIDSPTGKQDDGRSECHPLPLPPGSPTSPSALSNARANSLLENTTNNLSKWKKGKLLGRGTFGHVYMGFNSESGQMCAIKEVRVFSDDQTSKECLKQLNQEINLLSSLSHPNIVEYYGSELGEDTLSVYLEYVSGGSIHKLLQEYGPFKEPVIQNYVRQIVSGLAYLHGRNTVHRDIKGANILVDPNGEIKLADFGMAKHINSSTSMLSFKGSPYWMAPEVVMNTNGYNLAVDVWSLGCTILEMATSKPPWSQYEGVAAIFKIGNSKDMPEIPEHLSNDAKSFIQLCLQRDPSARPAAQRLLEHPFIRDQSATRAANVSLTRDAFPYMFDGSRTPPHVELHSSRTNMTSVDGDYATKPTFAASRGLRSPRDNTRMITSLPVSPCSSPLRQHGSAYKSCMLSPPHPTYSTMGQNTYNFSDICSHPVRSNATFNLDPWNERSLYNAHTPGGSPRRRLI 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2004 642 MobiDBLite consensus disorder prediction 105 143 - -
Prci9g2004 642 SMART serkin_6 237 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2004 642 Gene3D Transferase(Phosphotransferase) domain 1 234 514 - -
Prci9g2004 642 SUPERFAMILY Protein kinase-like (PK-like) 234 560 IPR011009 -
Prci9g2004 642 Pfam Protein kinase domain 238 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2004 642 MobiDBLite consensus disorder prediction 57 71 - -
Prci9g2004 642 FunFam Mitogen-activated protein kinase kinase kinase 235 517 - -
Prci9g2004 642 MobiDBLite consensus disorder prediction 1 225 - -
Prci9g2004 642 ProSiteProfiles Protein kinase domain profile. 237 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g2004 642 CDD STKc_MEKK1_plant 236 493 - -
Prci9g2004 642 ProSitePatterns Protein kinases ATP-binding region signature. 243 266 IPR017441 GO:0005524
Prci9g2004 642 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 72 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2004 Prci-Chr9 30887718 30893617 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2004 1 556 MAP Kinase Kinase Kinase AT1G53570 57.218 0.0 571
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Prci9g2004 Pkinase 1.6e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2004 K04421 - qsa:O6P43_030333 895.575