Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1995 ATGTCCAGAAGCAGTAGCAGTGAGAGTAAGAGTTGTAACAGAGGCCATTGGAGACCAGCTGAAGATGAGAGGCTGAAACAGCTTGTGGAGCAGTATGGTCCCCAGAACTGGAATTTCGTTGCAGAACATCTTGATGGGAGATCAGGGAAAAGTTGCAGACTGAGGTGGTACAACCAACTAGACCCAAACATAGTGAAAAGACCATTCACAGAGGAGGAGGAAGAAATACTGCTAGCTCTTCACAAGGTAAAGGGAAATAAATGGGCTGCAATTTCAAGGTTCTTACCTGGAAGAACTGATAATGCTGTCAAGAATCACTTCCATGTCCTTATGGCAAGGAGAAAGAGAGAACGTTACGCACTCCTTGGTGACAGAAGCAGCAGCCACACTGTTATTAATCATAATCATATTCCCATGCTTGACTCAACCACACGTAGGCCTGCCTCAGGGATTAATAACTTTACCTTCCAAAACAACAGAAACATGGGCATCTTCGATATGTCTTCCTCATGTTCATTGCTACTGAATCCTTGGAATACTCAAAGCGGTACTTCGACCATTACATCAGAGTTAGTGAACTTTGAACCTTCAGGTTCTGCTAAGCCTCACAATGATCATTCTAGTGCTTCAAGTCCTGCTTCTTGCTCGCTTAGCAGTTATATTAGTTTTACTGCACCAGGAATTCCTAGTATTGGTAAGGTCGTTCCTCTTCCTCATAGGTTCTCAAAATCCTATAATAATGCTCAAAGAACTGACGATTTTTCCATCAAAGGCATGGCAGACAAGATAACTCTGGAAGAACAAGTCGAAAAGCTTAAGGGAGTTTCCTTTATAGACTTTCTCGGTGTGGGAAGTTGTTCTGCCAGCGACAGTTGA 876 0.4315 MSRSSSSESKSCNRGHWRPAEDERLKQLVEQYGPQNWNFVAEHLDGRSGKSCRLRWYNQLDPNIVKRPFTEEEEEILLALHKVKGNKWAAISRFLPGRTDNAVKNHFHVLMARRKRERYALLGDRSSSHTVINHNHIPMLDSTTRRPASGINNFTFQNNRNMGIFDMSSSCSLLLNPWNTQSGTSTITSELVNFEPSGSAKPHNDHSSASSPASCSLSSYISFTAPGIPSIGKVVPLPHRFSKSYNNAQRTDDFSIKGMADKITLEEQVEKLKGVSFIDFLGVGSCSASDS 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1995 291 CDD SANT 76 111 IPR001005 -
Prci9g1995 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 115 IPR017930 -
Prci9g1995 291 Pfam Myb-like DNA-binding domain 14 60 IPR001005 -
Prci9g1995 291 Pfam Myb-like DNA-binding domain 66 110 IPR001005 -
Prci9g1995 291 CDD SANT 17 58 IPR001005 -
Prci9g1995 291 Gene3D - 67 132 - -
Prci9g1995 291 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Prci9g1995 291 SMART sant 65 113 IPR001005 -
Prci9g1995 291 SMART sant 13 62 IPR001005 -
Prci9g1995 291 SUPERFAMILY Homeodomain-like 13 107 IPR009057 -
Prci9g1995 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 64 IPR017930 -
Prci9g1995 291 PANTHER MYB PROTEIN-RELATED 14 203 - -
Prci9g1995 291 FunFam MYB transcription factor 14 65 - -
Prci9g1995 291 Gene3D - 14 65 - -
Prci9g1995 291 ProSiteProfiles Myb-like domain profile. 9 60 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1995 Prci-Chr9 30865180 30866742 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1995 1 189 MYB Transcription Factor Family AT4G33450 53.125 2.95e-66 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci9g1995 Myb_DNA-binding 1.5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1995 K09422 - ming:122071877 231.491