Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1987 ATGGCAGATGGAAGCGTCAACCTTCCTCCTGGGTTTCACTTCTCTCCAACGGATGAAGAACTTGTCCTTCACTTTCTATACAGCAAAGTTTCTCTTTCACCATGCCATCCTAACATCATCCCTGATCTTGATATTTCTGTGTCTGATCCTTGGGAATTAAAGGGTAAGGCGTTGTCAAGTGGAAATCAATACTATTTCTTCACCAAAGTGAACGAGAACAGAACCACACAAAGTGGGTATTGGAGAGAGATAGGACTCGCGGAGTCTATTGTCTCGGCCGTCGACAAGAAAGTGGGAGTCAAGAAGTACCTTGTATTCGACATAGGAGAAGCTCCAGAAGGTACTGAAACCAGCTGGGTAATGCAAGAGTATCTTCTTTGCTCATCAGGGAGTAACACGACATCACATAGAAGTAACAGAGGAAGAAAAAAACAGGATCAGAGCCAGAGCAAATGGGCTTTATGCCGCGTTTATGAAAGAAACAGAGATTCTCAACAAGAAGTGAACTGCTATGATGACGATGATGAAGATGACAGCAGAACAGAGCTTTCATGGATGGACGAAGTTTTTTTGTCGTTGGATGATGATCTTGAGGACATAAACCTGACTTATTAA 615 0.4293 MADGSVNLPPGFHFSPTDEELVLHFLYSKVSLSPCHPNIIPDLDISVSDPWELKGKALSSGNQYYFFTKVNENRTTQSGYWREIGLAESIVSAVDKKVGVKKYLVFDIGEAPEGTETSWVMQEYLLCSSGSNTTSHRSNRGRKKQDQSQSKWALCRVYERNRDSQQEVNCYDDDDEDDSRTELSWMDEVFLSLDDDLEDINLTY 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1987 204 ProSiteProfiles NAC domain profile. 8 160 IPR003441 GO:0003677|GO:0006355
Prci9g1987 204 SUPERFAMILY NAC domain 4 159 IPR036093 GO:0003677|GO:0006355
Prci9g1987 204 Gene3D NAC domain 17 165 IPR036093 GO:0003677|GO:0006355
Prci9g1987 204 PANTHER NAC TRANSCRIPTION FACTOR 56 8 174 - -
Prci9g1987 204 Pfam No apical meristem (NAM) protein 9 125 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1987 Prci-Chr9 30811532 30812643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1987 3 164 NAC Transcription Factor Family AT3G04070 40.230 2.00e-36 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci9g1987 NAM 1.5e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1987 - - gmx:100170711 302.367