Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1984 ATGGAAGATGAGAGCTACAACAATTTGCCAAATGGGGTCAGCACAGGAAGCCCTGAAAGCCCTTGCTTAAAGATATCAAGCAGCAGCAGCAGCAGCAACAACAATAGCAATAACAAAGAACAAGATCGCTTTCTGCCTATAGCCAATGTGGGAAGAATCATGAAGAAAGTGATGCCTGCGAATGGAAAAATCTCAAAGGACGCTAAAGAGACAGTTCAGGAATGTGTATCAGAGTTCATCAGCTTCGTCACGGGGGAAGCCTCTGATAAATGCCAAAGAGAGAAGAGGAAGACCATCAATGGGGATGATATCATATGGGCAATCACGACCCTAGGGTTTGAGGATTACGTGGGCCCTTTAAAATGTTATCTCCAGAAGTACAGAGACATAGAAGGAGAGAAGCTTAATATTCCAAAACAACAACGTTCTGAACATAGGCTACACCACCACCATCACCACCAAGACCAAACAAATAATAGTAATAACAATAATAATTTACCTTTAAGTAGTGTATATTCTTCCGCAAATCGAATTTCTCAGCCTCCCTATGTGCCCACTGGCCAGCCATATTCCCTGCCTTTCTCTCCTAATTCTATCAAACAGGACCAGATAGATTCCGTGGGGCACTGGTAA 633 0.4313 MEDESYNNLPNGVSTGSPESPCLKISSSSSSSNNNSNNKEQDRFLPIANVGRIMKKVMPANGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDIIWAITTLGFEDYVGPLKCYLQKYRDIEGEKLNIPKQQRSEHRLHHHHHHQDQTNNSNNNNNLPLSSVYSSANRISQPPYVPTGQPYSLPFSPNSIKQDQIDSVGHW 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1984 210 MobiDBLite consensus disorder prediction 7 43 - -
Prci9g1984 210 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 44 108 IPR003958 -
Prci9g1984 210 Gene3D Histone, subunit A 31 173 IPR009072 GO:0046982
Prci9g1984 210 SUPERFAMILY Histone-fold 41 155 IPR009072 GO:0046982
Prci9g1984 210 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 28 165 IPR027113 GO:0001228|GO:0006355|GO:0016602
Prci9g1984 210 PRINTS CCAAT-binding transcription factor subunit A signature 110 128 - -
Prci9g1984 210 PRINTS CCAAT-binding transcription factor subunit A signature 91 109 - -
Prci9g1984 210 PRINTS CCAAT-binding transcription factor subunit A signature 72 90 - -
Prci9g1984 210 MobiDBLite consensus disorder prediction 1 44 - -
Prci9g1984 210 FunFam Nuclear transcription factor Y subunit B-3 33 159 - -
Prci9g1984 210 ProSitePatterns NF-YB/HAP3 subunit signature. 75 91 IPR003956 GO:0005634|GO:0006355|GO:0043565
Prci9g1984 210 MobiDBLite consensus disorder prediction 157 204 - -
Prci9g1984 210 MobiDBLite consensus disorder prediction 141 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1984 Prci-Chr9 30788920 30789665 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1984 12 210 CCAAT-HAP3 Transcription Factor Family AT2G13570 61.033 4.10e-71 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Prci9g1984 CBFD_NFYB_HMF 2.9e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1984 K08065 - gmx:100778216 308.531